RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 SHISA8B8ZZ34 492 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 H0YC42 278 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 H3BML4 177 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 SDHDO14521 159 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 ANKRD28O15084 1053 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 FADS1O60427 444 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 SMNDC1O75940 238 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 KCNH1O95259 989 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 MAP3K8P41279 467 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 LHX2P50458 406 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 GAS1P54826 345 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 TPD52P55327 224 aaPredicted RBP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 GFRA1P56159 465 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 DSCR4P56555 118 aaPredicted RBP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 SIRPAP78324 504 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 EXOSC6Q5RKV6 272 aaKnown RBP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 FIGNL1Q6PIW4 674 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 POMZP3Q6PJE2 187 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 MAVSQ7Z434 540 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 KIF18BQ86Y91 864 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 LRRC34Q8IZ02 419 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 CNEP1R1Q8N9A8 125 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 OR2M3Q8NG83 312 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 NUDT8Q8WV74 236 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 RNF138Q8WVD3 245 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 C16orf58Q96GQ5 468 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 MAELQ96JY0 434 aaKnown RBP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 PPP1R36Q96LQ0 422 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 PPP3R2Q96LZ3 170 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 TM9SF2Q99805 663 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 C1orf50Q9BV19 199 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 RTN4RQ9BZR6 473 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 CLEC4MQ9H2X3 399 aaPredicted RBP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 PTGES2Q9H7Z7 377 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 MEAF6Q9HAF1 191 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 C3orf14Q9HBI5 128 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 CCM2LQ9NUG4 571 aaPredicted RBP11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 NTMQ9P121 344 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 ATP6V1HQ9UI12 483 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 ZNF337Q9Y3M9 751 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 SNX8Q9Y5X2 465 aa11.15□□□□□ -0.62
CCDC85C-202ENST00000554877 KIAA1549Q9HCM3 1950 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 B4DXG7 233 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 CTAG2O75638 210 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 RCBTB2O95199 551 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 IL33O95760 270 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 ANGPTL1O95841 491 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 TGM6O95932 706 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 IGKV1D-16P01601 117 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 DNAJA1P31689 397 aaKnown RBP11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 CPOXP36551 454 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 RNF144AP50876 292 aaPredicted RBP11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 IST1P53990 364 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 PSMD4P55036 377 aaKnown RBP11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 EMX2Q04743 252 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 PTGR1Q14914 329 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 POU4F3Q15319 338 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 GRAMD1BQ3KR37 738 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 FLYWCH1Q4VC44 716 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 HHATQ5VTY9 493 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 CAMKMTQ7Z624 323 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 MEIOBQ8N635 442 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 OR7A2PQ8NGA2 310 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 CEP70Q8NHQ1 597 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 MGARPQ8TDB4 240 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 FAM222BQ8WU58 562 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 WNT2BQ93097 391 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 COQ8BQ96D53 544 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 MTERF3Q96E29 417 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 ZBED6CLQ96FA7 236 aaPredicted RBP11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 PINK1Q9BXM7 581 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 AKTIPQ9H8T0 292 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 THAP1Q9NVV9 213 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 VDAC3Q9Y277 283 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 PLEKHA6Q9Y2H5 1048 aa11.14□□□□□ -0.63
CCDC85C-202ENST00000554877 TACC2O95359 2948 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 CCDC168Q8NDH2 2452 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 UQCRHLA0A096LP55 91 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 A6NNC1 897 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 CASKO14936 926 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 SCAMP2O15127 329 aaKnown RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 CFLARO15519 480 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 EMC8O43402 210 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 SLITRK5O94991 958 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 ALOX5P09917 674 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 ACP2P11117 423 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 PEPDP12955 493 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 HPGDP15428 266 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 ZNF708P17019 499 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 CHMP24386 653 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 SUCLG1P53597 346 aaKnown RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 DIO3P55073 304 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 CLDN18P56856 261 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 PSPHP78330 225 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 PDCD2Q16342 344 aaPredicted RBP11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 SGCBQ16585 318 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 SPDYE7PQ495Y7 208 aa11.13□□□□□ -0.63
CCDC85C-202ENST00000554877 VPS26BQ4G0F5 336 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms