RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 DIDO1Q9BTC0 2240 aaKnown RBP1.26□□□□□ -2.21
PRPF39-208ENST00000554785 OBSL1O75147 1896 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 TCHHQ07283 1943 aa1.26□□□□□ -2.21
PRPF39-208ENST00000554785 IGKV3D-15A0A087WSY6 115 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 IGHV3-38A0A0C4DH36 116 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 KRTAP16-1A8MUX0 517 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SLC28A1O00337 649 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SOCS3O14543 225 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TRAFD1O14545 582 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PRRG1O14668 218 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OGTO15294 1046 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 VEGFDO43915 354 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 LRP3O75074 770 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 STBD1O95210 358 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MT-ND3P03897 115 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 THEGLP0DJG4 465 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TDGF1P13385 188 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 B4GALT1P15291 398 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PSMC3P17980 439 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 UGT1A6P19224 532 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ADSSP30520 456 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 RPL9P32969 192 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 FHITP49789 147 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CRYBA2P53672 197 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ABCE1P61221 599 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 GALK2Q01415 458 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 GFPT1Q06210 699 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 RBBP4Q09028 425 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 KIAA0141Q14154 515 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 STX1AQ16623 288 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MS4A18Q3C1V0 323 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 FAM78AQ5JUQ0 283 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ETFRF1Q6IPR1 90 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CAPN13Q6MZZ7 669 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 C17orf64Q86WR6 236 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TBC1D10CQ8IV04 446 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 STHQ8IWL8 128 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OR4N5Q8IXE1 308 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PEX5LQ8IYB4 626 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 RTL3Q8N8U3 475 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 Q8NBF4 154 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SPPL2AQ8TCT8 520 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 LIPHQ8WWY8 451 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CPB2Q96IY4 423 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 C18orf12Q96KH6 178 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF560Q96MR9 790 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PRICKLE1Q96MT3 831 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ALKBH3Q96Q83 286 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NAP1L3Q99457 506 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 S1PR3Q99500 378 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 AGPAT1Q99943 283 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 LRRC61Q9BV99 259 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PINK1Q9BXM7 581 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NUSAP1Q9BXS6 441 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PARLQ9H300 379 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PLEKHA3Q9HB20 300 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ZFP14Q9HCL3 533 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 IL1RAPQ9NPH3 570 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 RGS18Q9NS28 235 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 FAM212BQ9NTI7 297 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MARCH5Q9NX47 278 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 EPS15L1Q9UBC2 864 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 APPL1Q9UKG1 709 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TDRKHQ9Y2W6 561 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NEUROG3Q9Y4Z2 214 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PRSS21Q9Y6M0 314 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 RNF215Q9Y6U7 377 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NF1P21359 2839 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CNTRLQ7Z7A1 2325 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OTOGQ6ZRI0 2925 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 NUP210Q8TEM1 1887 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PLIN4Q96Q06 1357 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MYH10P35580 1976 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MAP1AP78559 2803 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CITO14578 2027 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 DCHS2Q6V1P9 2916 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PDZD2O15018 2839 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 FBN3Q75N90 2809 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 IGHV4-30-2A0A087WSY4 118 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 A0A0J9YWU9 116 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 GSTTP1A0A1W2PQM5 241 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SYCE3A1L190 88 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 MBLAC1A4D2B0 266 aaPredicted RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OR5H15A6NDH6 313 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SPECC1L-ADORA2AF8WAN1 911 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ZBTB14O43829 449 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SNAP91O60641 907 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 HSF2BPO75031 334 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ATP6V1G1O75348 118 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SORBS2O94875 1100 aaKnown RBP1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OR6A2O95222 327 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 PRAMEF12O95522 483 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 TXNDC12O95881 172 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 SFTPBP07988 381 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 ABHD2P08910 425 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 OR4Q2P0C623 313 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 POLR2MP0CAP2 368 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CT45A8P0DMV1 189 aa1.25□□□□□ -2.21
PRPF39-208ENST00000554785 CT45A9P0DMV2 189 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms