RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OR6V1Q8N148 313 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 ZSCAN1Q8NBB4 408 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 FAM98AQ8NCA5 519 aaKnown RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 NAA11Q9BSU3 229 aaPredicted RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 FUZQ9BT04 418 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 FAIM2Q9BWQ8 316 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 SEC11CQ9BY50 192 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 RHBGQ9H310 441 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 FGF20Q9NP95 211 aaPredicted RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 ACKR4Q9NPB9 350 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 PXMP2Q9NR77 195 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 GFOD1Q9NXC2 390 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 FRMPD3Q5JV73 1810 aa8.96□□□□□ -0.97
SIX4-202ENST00000554079 LCTP09848 1927 aa8.96□□□□□ -0.97
SIX4-202ENST00000554079 MTCL1Q9Y4B5 1905 aaKnown RBP8.96□□□□□ -0.97
SIX4-202ENST00000554079 CD8B2A6NJW9 211 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ANHXE9PGG2 379 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ARPC1BO15143 372 aaKnown RBP8.96□□□□□ -0.98
SIX4-202ENST00000554079 GSTZ1O43708 216 aaPredicted RBP8.96□□□□□ -0.98
SIX4-202ENST00000554079 SLC25A12O75746 678 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 C6orf47O95873 294 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ACTL6AO96019 429 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 MMP10P09238 476 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 EBLN1P0CF75 366 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 CD8BP10966 210 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 PCGF2P35227 344 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 CEACAM6P40199 344 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 WDR5P61964 334 aaKnown RBP8.96□□□□□ -0.98
SIX4-202ENST00000554079 SELENOWP63302 87 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 SP4Q02446 784 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 SREBF2Q12772 1141 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 SNTB2Q13425 540 aaKnown RBP8.96□□□□□ -0.98
SIX4-202ENST00000554079 COTL1Q14019 142 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 HEPACAMQ14CZ8 416 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ZNF239Q16600 458 aaKnown RBP8.96□□□□□ -0.98
SIX4-202ENST00000554079 C18orf21Q32NC0 220 aaPredicted RBP8.96□□□□□ -0.98
SIX4-202ENST00000554079 SUPT20HL1Q3ZLR7 823 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ELFN2Q5R3F8 820 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 POMZP3Q6PJE2 187 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 BAIAP2L2Q6UXY1 529 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 RTL10Q7L3V2 364 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ARHGAP12Q8IWW6 846 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 TCEANCQ8N8B7 351 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 OR5J2Q8NH18 312 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 THEM6Q8WUY1 208 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ACOT11Q8WXI4 607 aaPredicted RBP8.96□□□□□ -0.98
SIX4-202ENST00000554079 SCLYQ96I15 445 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 SLC2A13Q96QE2 648 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ZNF559Q9BR84 538 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 UTP23Q9BRU9 249 aaKnown RBP8.96□□□□□ -0.98
SIX4-202ENST00000554079 TMED9Q9BVK6 235 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 OR10A4Q9H209 315 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 CDT1Q9H211 546 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 XKR8Q9H6D3 395 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 FLRT1Q9NZU1 646 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 ZNF69Q9UC07 566 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 POLLQ9UGP5 575 aa8.96□□□□□ -0.98
SIX4-202ENST00000554079 TRAPPC13A5PLN9 417 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 IFITM10A6NMD0 228 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 SNRPGP15A8MWD9 76 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 MED6O75586 246 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 F2P00734 622 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 HLA-DPB1P04440 258 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 IL5P05113 134 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 RNH1P13489 461 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 OSMP13725 252 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 HIST1H1BP16401 226 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 PSMB1P20618 241 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 CRABP1P29762 137 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 RPL3P39023 403 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 XCR1P46094 333 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 OR1E2P47887 323 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 CXCR3P49682 368 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 ZNF140P52738 457 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 H2BFSP57053 126 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 RPP30P78346 268 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 SRSF3P84103 164 aaKnown RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 SHC2P98077 582 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 ACVR1Q04771 509 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 GTF2H2Q13888 395 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 PCBP2Q15366 365 aaKnown RBP eCLIP8.95□□□□□ -0.98
SIX4-202ENST00000554079 C2orf68Q2NKX9 166 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 DEFB115Q30KQ5 88 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 IFI44LQ53G44 452 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 EOGTQ5NDL2 527 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 OR52W1Q6IF63 320 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 GTF2H2CQ6P1K8 395 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 TAC4Q86UU9 113 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 GPSM1Q86YR5 675 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 CDAN1Q8IWY9 1227 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 RGL4Q8IZJ4 473 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 CCDC54Q8NEL0 328 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 OR8J1Q8NGP2 316 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 PXYLP1Q8TE99 480 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 FGF11Q92914 225 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 MFFQ9GZY8 342 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 WDR13Q9H1Z4 485 aa8.95□□□□□ -0.98
SIX4-202ENST00000554079 TSPAN10Q9H1Z9 355 aaPredicted RBP8.95□□□□□ -0.98
SIX4-202ENST00000554079 UNKLQ9H9P5 680 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms