RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 PRAMEF20Q5VT98 475 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 PRAMEF8Q5VWM4 474 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 PRAMEF7Q5VXH5 474 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 BICRALQ6AI39 1079 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 TMEM81Q6P7N7 255 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 GALNTL5Q7Z4T8 443 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 IFNEQ86WN2 208 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 ZNF619Q8N2I2 560 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 TMEM178AQ8NBL3 297 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 NFKBIDQ8NI38 313 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 GRHL3Q8TE85 626 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 PNPLA2Q96AD5 504 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 UBL7Q96S82 380 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-209ENST00000553949 C1orf21Q9H246 121 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 METTL7AQ9H8H3 244 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 MTHFD2LQ9H903 347 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-209ENST00000553949 PROK2Q9HC23 129 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 BCL2L10Q9HD36 194 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 TAS2R1Q9NYW7 299 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 KLRF1Q9NZS2 232 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 ABCG2Q9UNQ0 655 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 KLF13Q9Y2Y9 288 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-209ENST00000553949 PCDHGB6Q9Y5F9 930 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
SHMT2-209ENST00000553949 BSNQ9UPA5 3926 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 DSPPQ9NZW4 1301 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 A0A0G2JMM0 328 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 A0A0G2JPF8 293 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 A0A1W2PPB8 328 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 A0A1W2PRS3 328 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 KIR3DP1A8MWS1 328 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 HNRNPCL2B2RXH8 293 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 HNRNPCL3B7ZW38 293 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 SCDO00767 359 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 HNRNPCL1O60812 293 aaKnown RBP11.21□□□□□ -0.61
SHMT2-209ENST00000553949 DNAJA2O60884 412 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 UGT2B17O75795 530 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 ATP5HO75947 161 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 PGM3O95394 542 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 OXSR1O95747 527 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-209ENST00000553949 HNRNPCL4P0DMR1 293 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 HPGDP15428 266 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 CNR1P21554 472 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 PCGF2P35227 344 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 PTGDSP41222 190 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 CLK3P49761 638 aaKnown RBP11.21□□□□□ -0.61
SHMT2-209ENST00000553949 GSK3BP49841 420 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 GPR85P60893 370 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 GABPB1Q06547 395 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-209ENST00000553949 SNTA1Q13424 505 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 VMACQ2NL98 169 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-209ENST00000553949 SLC6A19Q695T7 634 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 REEP3Q6NUK4 255 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 SLC30A6Q6NXT4 461 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 ERICH5Q6P6B1 374 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 APOOLQ6UXV4 268 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 BNC2Q6ZN30 1099 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-209ENST00000553949 SULF2Q8IWU5 870 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 ZNF527Q8NB42 609 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 POGLUT1Q8NBL1 392 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 HIPK4Q8NE63 616 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 OR2T12Q8NG77 320 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 BBS10Q8TAM1 723 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 PMM1Q92871 262 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 NTNG2Q96CW9 530 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 ZG16BQ96DA0 208 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 CDRT15Q96T59 188 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 DOHHQ9BU89 302 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 OSBPL11Q9BXB4 747 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 ANGPTL4Q9BY76 406 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 TBL1XR1Q9BZK7 514 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 QRSL1Q9H0R6 528 aaKnown RBP11.21□□□□□ -0.61
SHMT2-209ENST00000553949 ALG2Q9H553 416 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 GALNT9Q9HCQ5 603 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 DEPPQ9NTK1 212 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 GMPR2Q9P2T1 348 aaKnown RBP11.21□□□□□ -0.61
SHMT2-209ENST00000553949 KCNE5Q9UJ90 142 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 USP22Q9UPT9 525 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 ANGPT4Q9Y264 503 aa11.21□□□□□ -0.61
SHMT2-209ENST00000553949 CENPVL1A0A0U1RR11 272 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 ELOVL7A1L3X0 281 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 PINLYPA6NC86 204 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 PRORSD1PA6NEY8 169 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 AGAP5A6NIR3 686 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 ALG1L2C9J202 215 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 KLRC4-KLRK1H3BQV0 150 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 ADAM10O14672 748 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 ATXN7O15265 892 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-209ENST00000553949 GYG2O15488 501 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 SCO2O43819 266 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 PEX1O43933 1283 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 SNX4O95219 450 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 AQP1P29972 269 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 DNASE1L1P49184 302 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 GAS1P54826 345 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 KCNJ2P63252 427 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 KLRB1Q12918 225 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 ZNF141Q15928 474 aa11.2□□□□□ -0.62
SHMT2-209ENST00000553949 MAPK14Q16539 360 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms