RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FCARP24071 287 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 HMGB2P26583 209 aaKnown RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 HOXD10P28358 340 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PPP2R1BP30154 601 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 CASP14P31944 242 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 CDH4P55283 916 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 C21orf59P57076 290 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 RGS8P57771 180 aaPredicted RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 SNRPD1P62314 119 aaKnown RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 RPS15P62841 145 aaKnown RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 LIPEQ05469 1076 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 LGALS3BPQ08380 585 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 MERTKQ12866 999 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TFDP1Q14186 410 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SYPL1Q16563 259 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PCK2Q16822 640 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 LRIT3Q3SXY7 679 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 GGTA1PQ4G0N0 100 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 LINC01620Q4KN68 170 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 HIKESHIQ53FT3 197 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 XKR7Q5GH72 579 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 WLSQ5T9L3 541 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 RAET1LQ5VY80 246 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SLX4IPQ5VYV7 408 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 DMKNQ6E0U4 476 aaPredicted RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 OR2A2Q6IF42 318 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PWWP2BQ6NUJ5 590 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PNCKQ6P2M8 343 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 UTS2BQ765I0 119 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 FCRLAQ7L513 359 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PAQR7Q86WK9 346 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TMEM17Q86X19 198 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 LRRC75A-AS1Q8N1F1 130 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 CLEC4FQ8N1N0 589 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 COMMD1Q8N668 190 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TEX26Q8N6G2 289 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 CCDC185Q8N715 623 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 ZNF614Q8N883 585 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 CEP112Q8N8E3 955 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 Q8N9G6 341 aaPredicted RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 SPERTQ8NA61 448 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SYT14Q8NB59 555 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 ICA1LQ8NDH6 482 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 OR2T12Q8NG77 320 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 OLIG1Q8TAK6 271 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 MRGPRDQ8TDS7 321 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 MAIP1Q8WWC4 291 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.94□□□□□ -2.1
SRP54-204ENST00000553923 HSD17B8Q92506 261 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PIGCQ92535 297 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 ISG20Q96AZ6 181 aaKnown RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 TADA1Q96BN2 335 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 UPRTQ96BW1 309 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SH3YL1Q96HL8 342 aaPredicted RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 AGAP3Q96P47 875 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 CASD1Q96PB1 797 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TGM7Q96PF1 710 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TESK2Q96S53 571 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 COPS8Q99627 209 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 IL12RB2Q99665 862 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 OMDQ99983 421 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 APOOQ9BUR5 198 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 SHARPINQ9H0F6 387 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 EGLN3Q9H6Z9 239 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TMEM185BQ9H7F4 350 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 LPAR2Q9HBW0 351 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 MCCC2Q9HCC0 563 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 ZFP14Q9HCL3 533 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 ZNF701Q9NV72 531 aaPredicted RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 GHRLQ9UBU3 117 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 PILRBQ9UKJ0 227 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 ADAM28Q9UKQ2 775 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 IKZF3Q9UKT9 509 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.94□□□□□ -2.1
SRP54-204ENST00000553923 MEMO1Q9Y316 297 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 RNF115Q9Y4L5 304 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 V9GYY5 206 aaPredicted RBP1.94□□□□□ -2.1
SRP54-204ENST00000553923 CARMIL1Q5VZK9 1371 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 TNIKQ9UKE5 1360 aa1.94□□□□□ -2.1
SRP54-204ENST00000553923 CENPJQ9HC77 1338 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 A0A087WZ39 114 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 TRBV5-5A0A0J9YX44 114 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 MTMR11A4FU01 709 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 ACOD1A6NK06 481 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SNTNA6NMZ2 147 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 TCP10L2B9ZVM9 353 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 C9JVG2 144 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 K7ERI5 159 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 SIGLEC5O15389 551 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 DUX1O43812 170 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 TRIM3O75382 744 aaPredicted RBP1.93□□□□□ -2.1
SRP54-204ENST00000553923 LRCH4O75427 683 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CTAG2O75638 210 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 STAMBPO95630 424 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 NDUFB10O96000 172 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 OTCP00480 354 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 NGFP01138 241 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 MBP02144 154 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 CHRNA1P02708 482 aa1.93□□□□□ -2.1
SRP54-204ENST00000553923 FTH1P02794 183 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms