RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SERPINI1Q99574 410 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 PSME2Q9UL46 239 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 ABCG2Q9UNQ0 655 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 VDAC3Q9Y277 283 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 OR10H1Q9Y4A9 318 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 A0A0J9YW62 118 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF814B7Z6K7 855 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 SMAD9O15198 467 aaKnown RBP12.19□□□□□ -0.46
PRPF39-204ENST00000553605 NDUFB5O43674 189 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 GUCY1B2O75343 617 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 SEMA3DO95025 777 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF17P17021 662 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 ELK3P41970 407 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 CLK3P49761 638 aaKnown RBP12.19□□□□□ -0.46
PRPF39-204ENST00000553605 POU4F1Q01851 419 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 MGAT5Q09328 741 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 CARTPTQ16568 116 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 TIMM23BQ5SRD1 257 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 PDSS1Q5T2R2 415 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 HBMQ6B0K9 141 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF544Q6NX49 715 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 CCDC137Q6PK04 289 aaKnown RBP12.19□□□□□ -0.46
PRPF39-204ENST00000553605 B3GLCTQ6Y288 498 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 MARCH3Q86UD3 253 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 TDRPQ86YL5 185 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 WDR20Q8TBZ3 569 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 ABHD3Q8WU67 409 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 OSTF1Q92882 214 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 KLHL29Q96CT2 875 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 CNRIP1Q96F85 164 aaPredicted RBP12.19□□□□□ -0.46
PRPF39-204ENST00000553605 REXO5Q96IC2 774 aaKnown RBP12.19□□□□□ -0.46
PRPF39-204ENST00000553605 RHOJQ9H4E5 214 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 CAB39LQ9H9S4 337 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 FLRT3Q9NZU0 649 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 KLHL13Q9P2N7 655 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 CHMP2BQ9UQN3 213 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 ANGPTL3Q9Y5C1 460 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 FKBP7Q9Y680 259 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF780BQ9Y6R6 833 aa12.19□□□□□ -0.46
PRPF39-204ENST00000553605 LOC390937A0A1W2PQ73 354 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 TMPRSS2O15393 492 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 PHGDHO43175 533 aaKnown RBP12.18□□□□□ -0.46
PRPF39-204ENST00000553605 DHRS4L1P0CG22 281 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 PTAFRP25105 342 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 MAPK12P53778 367 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 CARD18P57730 90 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 RAC1P63000 192 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 SPOCK1Q08629 439 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 C17orf67Q0P5P2 114 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 ACAP2Q15057 778 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 RNPS1Q15287 305 aaKnown RBP12.18□□□□□ -0.46
PRPF39-204ENST00000553605 MIDNQ504T8 468 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF628Q5EBL2 1059 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 STEAP4Q687X5 459 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 HIST2H2BDQ6DRA6 164 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 Q6ZT83 130 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 PAGE2Q7Z2X7 111 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 P2RY8Q86VZ1 359 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 STAG3L4Q8TBR4 150 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF675Q8TD23 568 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 RNF128Q8TEB7 428 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 TRPC4APQ8TEL6 797 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 UBTD2Q8WUN7 234 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF681Q96N22 645 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 METTL17Q9H7H0 456 aaPredicted RBP12.18□□□□□ -0.46
PRPF39-204ENST00000553605 AHSPQ9NZD4 102 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 NUDT4Q9NZJ9 180 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 ADAM29Q9UKF5 820 aa12.18□□□□□ -0.46
PRPF39-204ENST00000553605 MTO1Q9Y2Z2 717 aaKnown RBP12.18□□□□□ -0.46
PRPF39-204ENST00000553605 PLCE1Q9P212 2302 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 LRP5LA4QPB2 252 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 SUPT3HB4E1H0 165 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 UGDHO60701 494 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 SUPT3HO75486 399 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 YES1P07947 543 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 GGT1P19440 569 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 PIK3CGP48736 1102 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 LGALS3BPQ08380 585 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 FRG1Q14331 258 aaKnown RBP12.17□□□□□ -0.46
PRPF39-204ENST00000553605 ERCC6LQ2NKX8 1250 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 TMEM139Q8IV31 216 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 CCDC116Q8IYX3 515 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 LINC01356Q8N9X3 169 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF540Q8NDQ6 660 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 ERP27Q96DN0 273 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 TSPAN17Q96FV3 270 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 NPAS1Q99742 590 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 INPP5KQ9BT40 448 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 MCMBPQ9BTE3 642 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 MRPL1Q9BYD6 325 aaKnown RBP12.17□□□□□ -0.46
PRPF39-204ENST00000553605 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 ALG9Q9H6U8 611 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 TMEM185BQ9H7F4 350 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 GP6Q9HCN6 339 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
PRPF39-204ENST00000553605 RNF11Q9Y3C5 154 aa12.17□□□□□ -0.46
PRPF39-204ENST00000553605 IGLV3-32A0A0A0MS00 114 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 TRIM77I1YAP6 450 aa12.16□□□□□ -0.46
PRPF39-204ENST00000553605 UBXN8O00124 270 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms