RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 EFHD2Q96C19 240 aaPredicted RBP12.68□□□□□ -0.38
APEX1-205ENST00000553555 ZNF347Q96SE7 839 aa12.68□□□□□ -0.38
APEX1-205ENST00000553555 ARHGDIGQ99819 225 aa12.68□□□□□ -0.38
APEX1-205ENST00000553555 KLHL4Q9C0H6 718 aa12.68□□□□□ -0.38
APEX1-205ENST00000553555 LIN28AQ9H9Z2 209 aaKnown RBP12.68□□□□□ -0.38
APEX1-205ENST00000553555 KCND3Q9UK17 655 aa12.68□□□□□ -0.38
APEX1-205ENST00000553555 SLC9A8Q9Y2E8 581 aa12.68□□□□□ -0.38
APEX1-205ENST00000553555 PCDHGA6Q9Y5G7 932 aa12.68□□□□□ -0.38
APEX1-205ENST00000553555 NSG1A0A0A6YYJ2 146 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 SAC3D1A6NKF1 404 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 CLDN24A6NM45 220 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 TSPAN2O60636 221 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 REM1O75628 298 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 NID1P14543 1247 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 SDHBP21912 280 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 LCN1P31025 176 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 DCTP40126 519 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 YAP1P46937 504 aaKnown RBP12.67□□□□□ -0.38
APEX1-205ENST00000553555 PDZK1Q5T2W1 519 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 RNF220Q5VTB9 566 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 PLAG1Q6DJT9 500 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 PRR22Q8IZ63 422 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 CATSPER1Q8NEC5 780 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 VANGL1Q8TAA9 524 aaPredicted RBP12.67□□□□□ -0.38
APEX1-205ENST00000553555 PCSK5Q92824 1860 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 CIB1Q99828 191 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 DEFB126Q9BYW3 111 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 HOXD1Q9GZZ0 328 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 VCX3BQ9H321 246 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 COQ10BQ9H8M1 238 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 RLIMQ9NVW2 624 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 KLHL28Q9NXS3 571 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 VNN3Q9NY84 501 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 SLC13A4Q9UKG4 626 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 PCNX3Q9H6A9 2034 aa12.67□□□□□ -0.38
APEX1-205ENST00000553555 J3KTA2 159 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 M0R3H8 397 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 DNAJB5O75953 348 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 RHCEP18577 417 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ABCD3P28288 659 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 PNLIPRP2P54317 469 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 PLCXD2Q0VAA5 305 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 RTP5Q14D33 572 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 GRAMD1BQ3KR37 738 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 EIPR1Q53HC9 387 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 TCTN3Q6NUS6 607 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 C16orf47Q6ZP98 133 aaPredicted RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 EPHX4Q8IUS5 362 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 IL22RA1Q8N6P7 574 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 OR6T1Q8NGN1 323 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 OR4C3Q8NH37 302 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 THAP3Q8WTV1 239 aaPredicted RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 OIT3Q8WWZ8 545 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 OMA1Q96E52 524 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ADOQ96SZ5 270 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 SLC29A1Q99808 456 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 C9orf16Q9BUW7 83 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ZNF160Q9HCG1 818 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 MMP25Q9NPA2 562 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 CNOT11Q9UKZ1 510 aaKnown RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 OAZ3Q9UMX2 235 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 FAM32AQ9Y421 112 aaKnown RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 DTNAQ9Y4J8 743 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 MRPS18BQ9Y676 258 aaKnown RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 EML6Q6ZMW3 1958 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 CDHR4A6H8M9 788 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 UTS2O95399 124 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 NADKO95544 446 aaPredicted RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 HPP00738 406 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 CELA2AP08217 269 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 CYP4B1P13584 511 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ZNF23P17027 643 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ZNF26P17031 533 aaPredicted RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 RRM2P31350 389 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 KRT20P35900 424 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 IST1P53990 364 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 NRG3P56975 720 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 PPP1R8Q12972 351 aaKnown RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 IL10RAQ13651 578 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 NPTX1Q15818 432 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 MRPL2Q5T653 305 aaKnown RBP12.66□□□□□ -0.38
APEX1-205ENST00000553555 PPP4R4Q6NUP7 873 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ZBTB49Q6ZSB9 765 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 TMEM179BQ7Z7N9 219 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ZNF605Q86T29 641 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 TAGAPQ8N103 731 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 OR5K1Q8NHB7 308 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 PIP5K1AQ99755 562 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 ARMC7Q9H6L4 198 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 EVA1AQ9H8M9 152 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 UBQLN4Q9NRR5 601 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 MYOTQ9UBF9 498 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 IL17BQ9UHF5 180 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 NPFFR2Q9Y5X5 522 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 CFAP54Q96N23 3096 aa12.66□□□□□ -0.38
APEX1-205ENST00000553555 MED13Q9UHV7 2174 aa12.65□□□□□ -0.38
APEX1-205ENST00000553555 PDLIM1O00151 329 aa12.65□□□□□ -0.38
APEX1-205ENST00000553555 WWP2O00308 870 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms