RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 LILRB1Q8NHL6 650 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-219ENST00000553488 FNDC9Q8TBE3 224 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 ACTRT1Q8TDG2 376 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 PBKQ96KB5 322 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 SLC39A3Q9BRY0 314 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 CENPKQ9BS16 269 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 BRINP2Q9C0B6 783 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 DDX47Q9H0S4 455 aaKnown RBP6.52□□□□□ -1.37
ATXN3-219ENST00000553488 ALG9Q9H6U8 611 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 WDR41Q9HAD4 459 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 OPTCQ9UBM4 332 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 DKKL1Q9UK85 242 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 CES1P1Q9UKY3 287 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 PLLPQ9Y342 182 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF175Q9Y473 711 aa6.52□□□□□ -1.37
ATXN3-219ENST00000553488 TRRAPQ9Y4A5 3859 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 ARFGEF3Q5TH69 2177 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 EFCAB8A8MWE9 144 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 CXorf49A8MYA2 514 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-219ENST00000553488 TSPAN2O60636 221 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 KERAO60938 352 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 SEMA3DO95025 777 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 IGHV4-39P01824 125 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 S100BP04271 92 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-219ENST00000553488 SOD3P08294 240 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 FAM157CP0CG43 387 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 PEPDP12955 493 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 PPP3CBP16298 524 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 NT5EP21589 574 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 TBXA2RP21731 343 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 GRK2P25098 689 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 PTX3P26022 381 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-219ENST00000553488 DPP4P27487 766 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 ACVR1BP36896 505 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 KCNJ5P48544 419 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 EMDP50402 254 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 XKP51811 444 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 SLC12A2P55011 1212 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 GPX6P59796 221 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 MAP4K2Q12851 820 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 FGFBP1Q14512 234 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 PON3Q15166 354 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 CHRFAM7AQ494W8 412 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 LIPJQ5W064 366 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 OR5M10Q6IEU7 315 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 ADAM5Q6NVV9 412 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 SLC48A1Q6P1K1 146 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 NPSR1Q6W5P4 371 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 MILR1Q7Z6M3 343 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 ISCA2Q86U28 154 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 UBQLNLQ8IYU4 475 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 METTL25Q8N6Q8 603 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 FADS6Q8N9I5 356 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 OR4K14Q8NGD5 310 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 OR52R1Q8NGF1 315 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 RAB3IL1Q8TBN0 382 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 AKAP1Q92667 903 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-219ENST00000553488 TMBIM1Q969X1 311 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 TSPAN17Q96FV3 270 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 COL21A1Q96P44 957 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 BTBD9Q96Q07 612 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 NAP1L3Q99457 506 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-219ENST00000553488 RBBP8Q99708 897 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 LRRC1Q9BTT6 524 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 PINK1Q9BXM7 581 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 KLHL4Q9C0H6 718 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 SLCO5A1Q9H2Y9 848 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 ZBTB26Q9HCK0 441 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 YAE1D1Q9NRH1 226 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 SIRT5Q9NXA8 310 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 NSMCE4AQ9NXX6 385 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 FBLN5Q9UBX5 448 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 PROCRQ9UNN8 238 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 LAMP3Q9UQV4 416 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 CFL2Q9Y281 166 aa6.51□□□□□ -1.37
ATXN3-219ENST00000553488 PKD1L1Q8TDX9 2849 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 DYSFO75923 2080 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 GOLGA6L10A0A0M3HER8 536 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 A8MV72 311 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 B2RBV5 119 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 SUPT3HB4E1H0 165 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 FOXE1O00358 373 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 SEC14L5O43304 696 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 UGDHO60701 494 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 SUPT3HO75486 399 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 AQP8O94778 261 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 SEC31AO94979 1220 aaKnown RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 CTAGE8P0CG41 777 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 CT45A8P0DMV1 189 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 CT45A9P0DMV2 189 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 PORP16435 677 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 STMN1P16949 149 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 DRD5P21918 477 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 CDKN1AP38936 164 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 PPICP45877 212 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 NEK2P51955 445 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 DSCR4P56555 118 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 ARL4CP56559 192 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 CLDN20P56880 219 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms