RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TMEM221A6NGB7 291 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 LRRC72A6NJI9 287 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 FCMRO60667 390 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 IGHA1P01876 353 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 HLA-DPB1P04440 258 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 UGT2B7P16662 529 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 MAGP20916 626 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 PTBP1P26599 531 aaKnown RBP eCLIP12.04□□□□□ -0.48
SHMT2-205ENST00000553474 HTR1FP30939 366 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 TRHRP34981 398 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-205ENST00000553474 EEF1A1P68104 462 aaKnown RBP12.04□□□□□ -0.48
SHMT2-205ENST00000553474 GPR50Q13585 617 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 LTB4RQ15722 352 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 PGGHGQ32M88 737 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF628Q5EBL2 1059 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 DDI2Q5TDH0 399 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 XKRXQ6PP77 449 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 FIGLAQ6QHK4 219 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 CCBE1Q6UXH8 406 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-205ENST00000553474 QSOX2Q6ZRP7 698 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF619Q8N2I2 560 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 SLC43A2Q8N370 569 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF485Q8NCK3 441 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 BRIX1Q8TDN6 353 aaKnown RBP12.04□□□□□ -0.48
SHMT2-205ENST00000553474 CDS1Q92903 461 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 ZG16BQ96DA0 208 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 SDF2Q99470 211 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 SDHCQ99643 169 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-205ENST00000553474 SNTG1Q9NSN8 517 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 POT1Q9NUX5 634 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 C14orf105Q9NVL8 296 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 CNIH4Q9P003 139 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 POLHQ9Y253 713 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 TMEM5Q9Y2B1 443 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 GPR55Q9Y2T6 319 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-205ENST00000553474 SF3B6Q9Y3B4 125 aaKnown RBP12.04□□□□□ -0.48
SHMT2-205ENST00000553474 V9GYH0 126 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 LRP4O75096 1905 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 TRIOO75962 3097 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 A0A1W2PS29 197 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 OR5K4A6NMS3 321 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 C2orf74A8MZ97 194 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 SEC14L5O43304 696 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 KCNK2O95069 426 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 ZIC2O95409 532 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-205ENST00000553474 KLF8O95600 359 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-205ENST00000553474 LIMS3P0CW19 117 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 LIMS4P0CW20 117 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 NID1P14543 1247 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 AK4P27144 223 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-205ENST00000553474 SLC1A3P43003 542 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 CAPZA2P47755 286 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 ILF3Q12906 894 aaKnown RBP eCLIP12.03□□□□□ -0.48
SHMT2-205ENST00000553474 C6orf132Q5T0Z8 1188 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 FHL5Q5TD97 284 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 OLIG3Q7RTU3 272 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 NKAIN4Q8IVV8 208 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 KLHL36Q8N4N3 616 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 GDPD1Q8N9F7 314 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 ASB15Q8WXK1 588 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 BMFQ96LC9 184 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 KLHL25Q9H0H3 589 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 C8orf33Q9H7E9 229 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-205ENST00000553474 MOV10Q9HCE1 1003 aaKnown RBP12.03□□□□□ -0.48
SHMT2-205ENST00000553474 TRPV5Q9NQA5 729 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 CTPS2Q9NRF8 586 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 ASB6Q9NWX5 421 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 ACTR10Q9NZ32 417 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 H2AFY2Q9P0M6 372 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-205ENST00000553474 NDRG2Q9UN36 371 aaKnown RBP12.03□□□□□ -0.48
SHMT2-205ENST00000553474 HS3ST3A1Q9Y663 406 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 SCN3AQ9NY46 2000 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 BDP1A6H8Y1 2624 aa12.03□□□□□ -0.48
SHMT2-205ENST00000553474 DYRK3O43781 588 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 ATP6V1G1O75348 118 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 CDRT1O95170 752 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 EML2O95834 649 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 COL9A1P20849 921 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 AKT2P31751 481 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 SRP54P61011 504 aaKnown RBP12.02□□□□□ -0.48
SHMT2-205ENST00000553474 LSM11P83369 360 aaKnown RBP eCLIP12.02□□□□□ -0.48
SHMT2-205ENST00000553474 SCN1BQ07699 218 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 RUNX2Q13950 521 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 DUSP5Q16690 384 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 DEFB134Q4QY38 66 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 PRRT3Q5FWE3 981 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 FCRL6Q6DN72 434 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 DESI1Q6ICB0 168 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 PAQR6Q6TCH4 344 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 METAP1DQ6UB28 335 aaPredicted RBP12.02□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF836Q6ZNA1 936 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 RNF44Q7L0R7 432 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 GDPD3Q7L5L3 318 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 TRIM48Q8IWZ4 208 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 NRMQ8IXM6 262 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 SIX5Q8N196 739 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 OR52L1Q8NGH7 329 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 COL26A1Q96A83 441 aa12.02□□□□□ -0.48
SHMT2-205ENST00000553474 TRMT61AQ96FX7 289 aaKnown RBP12.02□□□□□ -0.48
SHMT2-205ENST00000553474 SRRQ9GZT4 340 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms