RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PSMD4P55036 377 aaKnown RBP13.57□□□□□ -0.24
CACNB3-220ENST00000551716 TRA2BP62995 288 aaKnown RBP13.57□□□□□ -0.24
CACNB3-220ENST00000551716 IRF9Q00978 393 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 GTF2H2Q13888 395 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 PPA1Q15181 289 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 TSC22D1Q15714 1073 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 LTB4RQ15722 352 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 DECR1Q16698 335 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 TCHHL1Q5QJ38 904 aaPredicted RBP13.57□□□□□ -0.24
CACNB3-220ENST00000551716 FRG2Q64ET8 278 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 C11orf71Q6IPW1 123 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 GTF2H2CQ6P1K8 395 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 TFAP2EQ6VUC0 442 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 NPSR1Q6W5P4 371 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 BHLHA15Q7RTS1 189 aaPredicted RBP13.57□□□□□ -0.24
CACNB3-220ENST00000551716 TDRPQ86YL5 185 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 CCDC116Q8IYX3 515 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 DEPDC4Q8N2C3 294 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 MUC15Q8N387 334 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 BANPQ8N9N5 519 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 FBXO36Q8NEA4 188 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 TM4SF18Q96CE8 201 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 MSI2Q96DH6 328 aaKnown RBP13.57□□□□□ -0.24
CACNB3-220ENST00000551716 ADGRG7Q96K78 797 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 FRG2BQ96QU4 278 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 MRPL1Q9BYD6 325 aaKnown RBP13.57□□□□□ -0.24
CACNB3-220ENST00000551716 PFDN4Q9NQP4 134 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 NMRK1Q9NWW6 199 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 UTS2RQ9UKP6 389 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 CADP27708 2225 aa13.57□□□□□ -0.24
CACNB3-220ENST00000551716 GOLGA8QA0A0J9YX86 632 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 GOLGA8OA6NCC3 632 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 GOLGA8NF8WBI6 632 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 GOLGA8RI6L899 631 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 ABCD4O14678 606 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 NDUFB5O43674 189 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 EGR1P18146 543 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 PTNP21246 168 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 IVDP26440 423 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 CRABP2P29373 138 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 ALDH18A1P54886 795 aaKnown RBP13.56□□□□□ -0.24
CACNB3-220ENST00000551716 CARD18P57730 90 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 CHRNB3Q05901 458 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 IFT88Q13099 833 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 HBMQ6B0K9 141 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 TTC19Q6DKK2 380 aaPredicted RBP13.56□□□□□ -0.24
CACNB3-220ENST00000551716 SEZ6L2Q6UXD5 910 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 Q6ZSR9 355 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 RAPH1Q70E73 1250 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 ATG4DQ86TL0 474 aaPredicted RBP13.56□□□□□ -0.24
CACNB3-220ENST00000551716 GTPBP8Q8N3Z3 284 aaPredicted RBP13.56□□□□□ -0.24
CACNB3-220ENST00000551716 OR4N2Q8NGD1 307 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 RHEBL1Q8TAI7 183 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 OSTF1Q92882 214 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 ATP6V1E2Q96A05 226 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 RBBP8Q99708 897 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 TBL1XR1Q9BZK7 514 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 KLHL13Q9P2N7 655 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 PMF1-BGLAPU3KQ54 211 aa13.56□□□□□ -0.24
CACNB3-220ENST00000551716 A0A0A6YYJ9 748 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 SLCO1B7G3V0H7 640 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 PLOD3O60568 738 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 TGFAP01135 160 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 LTA4HP09960 611 aaKnown RBP13.55□□□□□ -0.24
CACNB3-220ENST00000551716 APEHP13798 732 aaKnown RBP13.55□□□□□ -0.24
CACNB3-220ENST00000551716 MTHFD2P13995 350 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 GFAPP14136 432 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 GP5P40197 560 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 ARL1P40616 181 aaPredicted RBP13.55□□□□□ -0.24
CACNB3-220ENST00000551716 ALDH9A1P49189 494 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 DUSP2Q05923 314 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 PDIA2Q13087 525 aaKnown RBP13.55□□□□□ -0.24
CACNB3-220ENST00000551716 PFKFB4Q16877 469 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 TIMM23BQ5SRD1 257 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 CPTPQ5TA50 214 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 ZNF544Q6NX49 715 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 TMEM108Q6UXF1 575 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 COMMD6Q7Z4G1 85 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 MARCH3Q86UD3 253 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 C3orf56Q8N813 242 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 ACTRT1Q8TDG2 376 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 ZBTB8AQ96BR9 441 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 MTBPQ96DY7 904 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 GIMAP4Q9NUV9 329 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 POU2F3Q9UKI9 436 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 JRKLQ9Y4A0 524 aa13.55□□□□□ -0.24
CACNB3-220ENST00000551716 YLPM1P49750 1951 aaKnown RBP13.54□□□□□ -0.24
CACNB3-220ENST00000551716 C7orf72A4D263 438 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 GOLGA6L6A8MZA4 724 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 E7EQL1 145 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 TNFSF11O14788 317 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 COQ9O75208 318 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 PRKD3O94806 890 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 YES1P07947 543 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 ITGA2P17301 1181 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 PTAFRP25105 342 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 MPIP34949 423 aa13.54□□□□□ -0.24
CACNB3-220ENST00000551716 SPRP35270 261 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-220ENST00000551716 SRP14P37108 136 aaKnown RBP13.54□□□□□ -0.24
CACNB3-220ENST00000551716 PDLIM4P50479 330 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms