RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 RPA2P15927 270 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ANXA7P20073 488 aaKnown RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 RAB4AP20338 218 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CNR1P21554 472 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 IDSP22304 550 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PCGF2P35227 344 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CASP2P42575 452 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 AVPR1BP47901 424 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 LHX1P48742 406 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 MMP15P51511 669 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 EFNA5P52803 228 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 GEMP55040 296 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 GFRA1P56159 465 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 WNT3P56703 355 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CDC42P60953 191 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 RAB5BP61020 215 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 SIM1P81133 766 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 HTRA3P83110 453 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 FABP5Q01469 135 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 DEFA5Q01523 94 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 SEMG2Q02383 582 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 SLC3A1Q07837 685 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CHAF1BQ13112 559 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CRHR2Q13324 411 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 SLC14A1Q13336 389 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 MTMR1Q13613 665 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ALKBH1Q13686 389 aaKnown RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CAPSQ13938 189 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 BOP1Q14137 746 aaKnown RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PPA1Q15181 289 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PTGES3Q15185 160 aaKnown RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 NR0B2Q15466 257 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 MPPED2Q15777 294 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CSRP2Q16527 193 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 FAM174BQ3ZCQ3 159 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 SPDYE7PQ495Y7 208 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 USP39Q53GS9 565 aaKnown RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 DGKKQ5KSL6 1271 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 EOGTQ5NDL2 527 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 GCNT6Q5T4J0 391 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF648Q5T619 568 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF57Q68EA5 555 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CXorf57Q6NSI4 855 aaKnown RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 KIAA1161Q6NSJ0 714 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 RPL13AP3Q6NVV1 102 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PLBD1Q6P4A8 553 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PAQR6Q6TCH4 344 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 VITQ6UXI7 678 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 GSG1LQ6UXU4 331 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF813Q6ZN06 617 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 DPH6Q7L8W6 267 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 FAM122BQ7Z309 247 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PLEKHH3Q7Z736 793 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ATG4DQ86TL0 474 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 TSPAN33Q86UF1 283 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PIM3Q86V86 326 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 TPRA1Q86W33 373 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 LRRC28Q86X40 367 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 FAM131BQ86XD5 332 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CBLN2Q8IUK8 224 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 SIAH3Q8IW03 269 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 FAM217AQ8IXS0 508 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 GPR135Q8IZ08 494 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 OR4N4Q8N0Y3 316 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 OR6V1Q8N148 313 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 C15orf54Q8N8G6 183 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF527Q8NB42 609 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 NETO2Q8NC67 525 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CCNYQ8ND76 341 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 OR52I1Q8NGK6 324 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 OR10Q1Q8NGQ4 319 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 COQ8AQ8NI60 647 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 TFGQ92734 400 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PPP1R14AQ96A00 147 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PHYHIPLQ96FC7 376 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CASD1Q96PB1 797 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ABHD1Q96SE0 405 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 NIPSNAP1Q9BPW8 284 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 WDR77Q9BQA1 342 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 FUZQ9BT04 418 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 SOX7Q9BT81 388 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 NTMT1Q9BV86 223 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 GGACTQ9BVM4 153 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CACNG6Q9BXT2 260 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 NLNQ9BYT8 704 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 POLR2J2Q9GZM3 115 aaKnown RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 OSGEPL1Q9H4B0 414 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 MVB12BQ9H7P6 319 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 MYOZ1Q9NP98 299 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PRMT8Q9NR22 394 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 CTPS2Q9NRF8 586 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 MRPL17Q9NRX2 175 aaKnown RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 RNF146Q9NTX7 359 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 ACER3Q9NUN7 267 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 TMEM100Q9NV29 134 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 TAS2R5Q9NYW4 299 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 PPP4R1LQ9P1A2 415 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 MARCH4Q9P2E8 410 aaPredicted RBP4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 GALPQ9UBC7 116 aa4.95□□□□□ -1.62
LSM3P2-201ENST00000551246 COMMD3Q9UBI1 195 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms