RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CD8BP10966 210 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 IMPDH1P20839 514 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 FPR1P21462 350 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 CRYGSP22914 178 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 ATP5F1P24539 256 aaPredicted RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 ECHS1P30084 290 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 CCKARP32238 428 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 UGT2B10P36537 528 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 CD79BP40259 229 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 CLK3P49761 638 aaKnown RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 HTR6P50406 440 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 PRKAA2P54646 552 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 PSMD4P55036 377 aaKnown RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 PKNOX1P55347 436 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 FAM27E3Q08E93 113 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 ZNF763Q0D2J5 394 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 ZNF155Q12901 538 aaPredicted RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 CYP27C1Q4G0S4 372 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 TEX35Q5T0J7 233 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 RAET1LQ5VY80 246 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 VWA1Q6PCB0 445 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 PLXDC2Q6UX71 529 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 SLC44A2Q8IWA5 706 aaPredicted RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 UBQLNLQ8IYU4 475 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 OR2L13Q8N349 312 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 C17orf53Q8N3J3 647 aaPredicted RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 MMGT1Q8N4V1 131 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 OR4N2Q8NGD1 307 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 ZNF592Q92610 1267 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 L3HYPDHQ96EM0 354 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 PGM2Q96G03 612 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 BBS4Q96RK4 519 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 SLC39A3Q9BRY0 314 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 PTGES2Q9H7Z7 377 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 RNF122Q9H9V4 155 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 Q9N2J8 555 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 FAM120CQ9NX05 1096 aaKnown RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 TAS2R7Q9NYW3 318 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 TMEM216Q9P0N5 145 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 C6orf203Q9P0P8 240 aaPredicted RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 DMGDHQ9UI17 866 aaKnown RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 MRTO4Q9UKD2 239 aaKnown RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 GRID1Q9ULK0 1009 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 C19orf53Q9UNZ5 99 aaPredicted RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 WBP11Q9Y2W2 641 aaKnown RBP6.87□□□□□ -1.31
NEK3-201ENST00000550331 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.87□□□□□ -1.31
NEK3-201ENST00000550331 ZANQ9Y493 2812 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 NCKAP5O14513 1909 aa6.87□□□□□ -1.31
NEK3-201ENST00000550331 INAFM1C9JVW0 142 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 C16orf97H3BN30 126 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 H3BQF6 201 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 H7C1Q1 480 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 SCO2O43819 266 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 FADS1O60427 444 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 SMPD2O60906 423 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 NME6O75414 186 aaPredicted RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 URI1O94763 535 aaPredicted RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 IL33O95760 270 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 CGAP01215 116 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 C8BP07358 591 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 GSTA1P08263 222 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 CTAGE8P0CG41 777 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 FCGR2AP12318 317 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 POU2F1P14859 743 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 HK1P19367 917 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 TCEA1P23193 301 aaKnown RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 NTSP30990 170 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 KIR2DL2P43627 348 aaPredicted RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 NCBP2P52298 156 aaKnown RBP eCLIP6.86□□□□□ -1.31
NEK3-201ENST00000550331 CLDN15P56746 228 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 NAA20P61599 178 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 ZNHIT3Q15649 155 aaPredicted RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 ACKR1Q16570 336 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 DECR1Q16698 335 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 GLYR1Q49A26 553 aaPredicted RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 GLE1Q53GS7 698 aaKnown RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 ARSJQ5FYB0 599 aaPredicted RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 Q5PR19 223 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 FAM219BQ5XKK7 198 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 ZNF474Q6S9Z5 364 aaPredicted RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 PRSS57Q6UWY2 283 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 TMEM107Q6UX40 140 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 IKBIPQ70UQ0 350 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 FAM214BQ7L5A3 538 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 BTLAQ7Z6A9 289 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 P3H2Q8IVL5 708 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 CTAGE4Q8IX94 777 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 METTL25Q8N6Q8 603 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 CNEP1R1Q8N9A8 125 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 NOA1Q8NC60 698 aaKnown RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 UHMK1Q8TAS1 419 aaKnown RBP6.86□□□□□ -1.31
NEK3-201ENST00000550331 FAM76AQ8TAV0 307 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.86□□□□□ -1.31
NEK3-201ENST00000550331 ACMSDQ8TDX5 336 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 WFDC12Q8WWY7 111 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 IFT81Q8WYA0 676 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 CAVIN3Q969G5 261 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 CCDC126Q96EE4 140 aa6.86□□□□□ -1.31
NEK3-201ENST00000550331 ZNF845Q96IR2 970 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms