RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CCM2LQ9NUG4 571 aaPredicted RBP9.83□□□□□ -0.84
VTI1BP3-201ENST00000550220 ATAD3AQ9NVI7 634 aa9.83□□□□□ -0.84
VTI1BP3-201ENST00000550220 GALNT8Q9NY28 637 aa9.83□□□□□ -0.84
VTI1BP3-201ENST00000550220 FIS1Q9Y3D6 152 aa9.83□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZNF337Q9Y3M9 751 aa9.83□□□□□ -0.84
VTI1BP3-201ENST00000550220 ABCA4P78363 2273 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 HIVEP1P15822 2718 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 A0A1W2PNV4 684 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 SH3D21A4FU49 640 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 AKAP10O43572 662 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 TNFSF13O75888 250 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 TGM6O95932 706 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 KRT16P08779 473 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 ALOX5P09917 674 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 BCKDHAP12694 445 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 CD99P14209 185 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZNF17P17021 662 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 TBXA2RP21731 343 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 ALDH3A1P30838 453 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 MAP3K8P41279 467 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 PRKAG1P54619 331 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 STX5Q13190 355 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 KEAP1Q14145 624 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 SGCBQ16585 318 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 LSM12Q3MHD2 195 aaKnown RBP9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 GALNTL6Q49A17 601 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 ATP6AP1LQ52LC2 224 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 ARL13AQ5H913 290 aaPredicted RBP9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 EMBQ6PCB8 327 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 WDR75Q8IWA0 830 aaKnown RBP9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 UBQLNLQ8IYU4 475 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 GCNT2Q8N0V5 402 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 CNEP1R1Q8N9A8 125 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 OR2T11Q8NH01 316 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 FAM110BQ8TC76 370 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 TWIST2Q8WVJ9 160 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 SLC9A6Q92581 669 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 NRGNQ92686 78 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 CIDECQ96AQ7 238 aaPredicted RBP9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZBTB8AQ96BR9 441 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 STARD4Q96DR4 205 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 TSSK3Q96PN8 268 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 FAM111AQ96PZ2 611 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 STACQ99469 402 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 HOXD1Q9GZZ0 328 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 C12orf65Q9H3J6 166 aaKnown RBP9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 TUBB1Q9H4B7 451 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 EQTNQ9NQ60 294 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 DUSP22Q9NRW4 184 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZNF226Q9NYT6 803 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 BAIAP2L1Q9UHR4 511 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 LGALS13Q9UHV8 139 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 ATP6V1HQ9UI12 483 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 EIF3LQ9Y262 564 aaKnown RBP9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 C2CD3Q4AC94 2353 aa9.82□□□□□ -0.84
VTI1BP3-201ENST00000550220 AKAP6Q13023 2319 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 A0A1W2PQD3 144 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 A0A1W2PRB8 838 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 OR2M5A3KFT3 312 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 C7orf72A4D263 438 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 SCDO00767 359 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 KCNK2O95069 426 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 SNUPNO95149 360 aaKnown RBP9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 RAF1P04049 648 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 FREM3P0C091 2139 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 CD8BP10966 210 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 EIF1P41567 113 aaKnown RBP9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 MAD2L1Q13257 205 aaPredicted RBP9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 TMEM44Q2T9K0 475 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 GRAMD1BQ3KR37 738 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 UGT3A2Q3SY77 523 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 PDSS1Q5T2R2 415 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 CPTPQ5TA50 214 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 GTF2IRD2BQ6EKJ0 949 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 ANKRD26P1Q6NSI1 321 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 MFSD12Q6NUT3 480 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 BHLHB9Q6PI77 547 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 PAMR1Q6UXH9 720 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 SZRD1Q7Z422 152 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 MTERF4Q7Z6M4 381 aaKnown RBP9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 GTF2IRD2Q86UP8 949 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 TGIF2LYQ8IUE0 185 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 KIRREL3Q8IZU9 778 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 GTPBP8Q8N3Z3 284 aaPredicted RBP9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 METTL25Q8N6Q8 603 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 COX18Q8N8Q8 333 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZNF527Q8NB42 609 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 LRRN4CLQ8ND94 238 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 TCP10LQ8TDR4 215 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 OR5P2Q8WZ92 322 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 PIK3R3Q92569 461 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 MOAP1Q96BY2 351 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 PGM2Q96G03 612 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZNF845Q96IR2 970 aaPredicted RBP9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 BTBD2Q9BX70 525 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 PINK1Q9BXM7 581 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 PRRG4Q9BZD6 226 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 RNF122Q9H9V4 155 aa9.81□□□□□ -0.84
VTI1BP3-201ENST00000550220 GLRX2Q9NS18 164 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms