RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 GXYLT2A0PJZ3 443 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 SH3D21A4FU49 640 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 OR6C70A6NIJ9 312 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 ALDH3B2P48448 385 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 GRM7Q14831 915 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 PTOV1Q86YD1 416 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 TNFAIP8L1Q8WVP5 186 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 NARS2Q96I59 477 aaKnown RBP14.07□□□□□ -0.16
CUX1-214ENST00000550008 G6PC3Q9BUM1 346 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 ZNF576Q9H609 170 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 UCKL1Q9NWZ5 548 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 CEP250Q9BV73 2442 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 CACNA1EQ15878 2313 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 A0A1W2PQL4 384 aaPredicted RBP14.07□□□□□ -0.16
CUX1-214ENST00000550008 GPR89AB7ZAQ6 455 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 ARL6IP5O75915 188 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 OPN1LWP04000 364 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 HEXBP07686 556 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 GPR89BP0CG08 455 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 CBLBQ13191 982 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 MRPL2Q5T653 305 aaKnown RBP14.07□□□□□ -0.16
CUX1-214ENST00000550008 GID4Q8IVV7 300 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 TMEM151BQ8IW70 566 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 NEURL3Q96EH8 262 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 MRGPRX3Q96LB0 322 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 FOXN4Q96NZ1 517 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 NTN4Q9HB63 628 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 ASIC5Q9NY37 505 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 C17orf105B2RV13 164 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 GPR75O95800 540 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 ZNF24P17028 368 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 CD97P48960 835 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 TMEM196Q5HYL7 178 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 WDR45BQ5MNZ6 344 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 NIPAL1Q6NVV3 410 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 ZCCHC12Q6PEW1 402 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 MRPL38Q96DV4 380 aaKnown RBP14.06□□□□□ -0.16
CUX1-214ENST00000550008 C6orf106Q9H6K1 298 aaPredicted RBP14.06□□□□□ -0.16
CUX1-214ENST00000550008 STUB1Q9UNE7 303 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 NTNG1Q9Y2I2 539 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 LOC100509620A0A075B734 347 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 TRBV2A0A0J9YWF9 115 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 DUX1O43812 170 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 FBLP22087 321 aaKnown RBP14.06□□□□□ -0.16
CUX1-214ENST00000550008 F8A1P23610 371 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 TGFBR1P36897 503 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 ZNF627Q7L945 461 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 UBE2Q1Q7Z7E8 422 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 TOMM5Q8N4H5 51 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 OR4K17Q8NGC6 315 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 SLC7A13Q8TCU3 470 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 SLC37A2Q8TED4 501 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 OR52D1Q9H346 318 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 TMEM185BQ9H7F4 350 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 SACM1LQ9NTJ5 587 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 PCDHGB1Q9Y5G3 927 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 TNS1Q9HBL0 1735 aaKnown RBP14.06□□□□□ -0.16
CUX1-214ENST00000550008 MAN2B1O00754 1011 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 TACSTD2P09758 323 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 OPRD1P41143 372 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 PPP5CP53041 499 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 PPP3R1P63098 170 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 ZNF45Q02386 682 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 KIAA0040Q15053 153 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 TP53I3Q53FA7 332 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 GALNTL5Q7Z4T8 443 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 SYNPOQ8N3V7 929 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 ACOT11Q8WXI4 607 aaPredicted RBP14.06□□□□□ -0.16
CUX1-214ENST00000550008 MBOAT4Q96T53 435 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 C14orf105Q9NVL8 296 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 WBP1LQ9NX94 342 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 MRPL15Q9P015 296 aaKnown RBP14.06□□□□□ -0.16
CUX1-214ENST00000550008 TMPRSS11EQ9UL52 423 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 ENTPD2Q9Y5L3 495 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 IER3IP1Q9Y5U9 82 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 FAM221BA6H8Z2 402 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 CLDN24A6NM45 220 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 ZNF670-ZNF695F2Z2N8 137 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 DLGAP1O14490 977 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 SLC6A9P48067 706 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 WNT4P56705 351 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 Q8N402 240 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 BPIFA2Q96DR5 249 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 CENPOQ9BU64 300 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 SGPP1Q9BX95 441 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 FBRSQ9HAH7 460 aa14.06□□□□□ -0.16
CUX1-214ENST00000550008 DHCR7Q9UBM7 475 aaKnown RBP14.06□□□□□ -0.16
CUX1-214ENST00000550008 SOBPA7XYQ1 873 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 FLRT2O43155 660 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 ITGA10O75578 1167 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 SERPINA3P01011 423 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 PDX1P52945 283 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 CTXN1P60606 82 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 TRMT12Q53H54 448 aaKnown RBP14.05□□□□□ -0.16
CUX1-214ENST00000550008 KDM4DQ6B0I6 523 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 HRASLS5Q96KN8 279 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 MAP3K3Q99759 626 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 RNF167Q9H6Y7 350 aa14.05□□□□□ -0.16
CUX1-214ENST00000550008 NEK6Q9HC98 313 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms