RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CEP70Q8NHQ1 597 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 PSMA8Q8TAA3 256 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 JADE3Q92613 823 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 ZNF524Q96C55 264 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 MARK4Q96L34 752 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 TRIB1Q96RU8 372 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 TUBA1CQ9BQE3 449 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 TRIM8Q9BZR9 551 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 BHLHE41Q9C0J9 482 aaPredicted RBP8.87□□□□□ -0.99
HDAC7-229ENST00000549883 C3orf14Q9HBI5 128 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 FAM120CQ9NX05 1096 aaKnown RBP8.87□□□□□ -0.99
HDAC7-229ENST00000549883 GIN1Q9NXP7 522 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 COQ3Q9NZJ6 369 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 DKKL1Q9UK85 242 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 ADGRG4Q8IZF6 3080 aa8.87□□□□□ -0.99
HDAC7-229ENST00000549883 AHRRA9YTQ3 701 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ZNF195O14628 629 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 KCNH1O95259 989 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 CPSF4O95639 269 aaKnown RBP8.86□□□□□ -0.99
HDAC7-229ENST00000549883 OXSR1O95747 527 aaPredicted RBP8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ANGPTL1O95841 491 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 EPPINO95925 133 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ALOX5P09917 674 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 COX6B1P14854 86 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 GABRA1P14867 456 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 HK1P19367 917 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 SOAT1P35610 550 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 RPL3P39023 403 aaKnown RBP8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ZFP36L2P47974 494 aaKnown RBP8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ZNF136P52737 540 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 SLC18A1P54219 525 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 DLX5P56178 289 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 CLDN18P56856 261 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 KRTAP10-9P60411 292 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 FOXF2Q12947 444 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 CD226Q15762 336 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 NDUFAF6Q330K2 333 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 SPDYE7PQ495Y7 208 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 SLC9B1Q4ZJI4 515 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 SPANXN4Q5MJ08 99 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 AGBL2Q5U5Z8 902 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ARSKQ6UWY0 536 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 MEX3BQ6ZN04 569 aaKnown RBP8.86□□□□□ -0.99
HDAC7-229ENST00000549883 CAMKMTQ7Z624 323 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 IFNEQ86WN2 208 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 COX18Q8N8Q8 333 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 C9orf106Q8NAJ2 232 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ASB5Q8WWX0 329 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ZNF75CPQ92670 426 aaPredicted RBP8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ARSGQ96EG1 525 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 CHMP6Q96FZ7 201 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 SFXN2Q96NB2 322 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 OR7D2Q96RA2 312 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 DPY30Q9C005 99 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ENKD1Q9H0I2 346 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 MANSC1Q9H8J5 431 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 CHST11Q9NPF2 352 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 THAP1Q9NVV9 213 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 NKIRAS1Q9NYS0 192 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ABCG2Q9UNQ0 655 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 ABCA12Q86UK0 2595 aa8.86□□□□□ -0.99
HDAC7-229ENST00000549883 CENPVL1A0A0U1RR11 272 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 HDAC3O15379 428 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 ACTL6AO96019 429 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 CPN1P15169 458 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 H2AFXP16104 143 aaPredicted RBP8.85□□□□□ -0.99
HDAC7-229ENST00000549883 IGFBP2P18065 325 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 TBXA2RP21731 343 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 CEACAM8P31997 349 aaPredicted RBP8.85□□□□□ -0.99
HDAC7-229ENST00000549883 PRIM2P49643 509 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 SUCLG1P53597 346 aaKnown RBP8.85□□□□□ -0.99
HDAC7-229ENST00000549883 PSPHP78330 225 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 POU6F2P78424 691 aaPredicted RBP8.85□□□□□ -0.99
HDAC7-229ENST00000549883 PRR5P85299 388 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 MAD2L1Q13257 205 aaPredicted RBP8.85□□□□□ -0.99
HDAC7-229ENST00000549883 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC7-229ENST00000549883 SMU1Q2TAY7 513 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 FAM174BQ3ZCQ3 159 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC7-229ENST00000549883 RIPPLY2Q5TAB7 128 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 NSUN5P2Q63ZY6 315 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 OGFOD2Q6N063 350 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 CDC73Q6P1J9 531 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 C1GALT1C1Q96EU7 318 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 SH3YL1Q96HL8 342 aaPredicted RBP8.85□□□□□ -0.99
HDAC7-229ENST00000549883 OR52B2Q96RD2 323 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 INPP5KQ9BT40 448 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 BTBD2Q9BX70 525 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 ACTRT3Q9BYD9 372 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 TBL1XR1Q9BZK7 514 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 PIGUQ9H490 435 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 SLCO1B3Q9NPD5 702 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 KCNJ16Q9NPI9 418 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 ATAD3AQ9NVI7 634 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 AIG1Q9NVV5 245 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 ZNF337Q9Y3M9 751 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 PCDHGB3Q9Y5G1 929 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 GPR45Q9Y5Y3 372 aa8.85□□□□□ -0.99
HDAC7-229ENST00000549883 IGLV3-32A0A0A0MS00 114 aa8.84□□□□□ -0.99
HDAC7-229ENST00000549883 RNF103-CHMP3A0A140T963 221 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms