RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ANXA4P09525 319 aaPredicted RBP10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 TAC1P20366 129 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 CADP27708 2225 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 GABRA3P34903 492 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 CAPRIN1Q14444 709 aaKnown RBP10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 DECR1Q16698 335 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 CLEC12BQ2HXU8 276 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 HMBOX1Q6NT76 420 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 APOOLQ6UXV4 268 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 STAC2Q6ZMT1 411 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 SH2D5Q6ZV89 423 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 TRMT10CQ7L0Y3 403 aaKnown RBP10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 EXOC3L1Q86VI1 746 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 IFT20Q8IY31 132 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 RNF138Q8WVD3 245 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 PIK3R3Q92569 461 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 NEUROG1Q92886 237 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 ERP27Q96DN0 273 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 C1QTNF3Q9BXJ4 246 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 TBL1XR1Q9BZK7 514 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 ACTR6Q9GZN1 396 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 TMEM185BQ9H7F4 350 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 EQTNQ9NQ60 294 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 PLSCR4Q9NRQ2 329 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 ZNF175Q9Y473 711 aa10.71□□□□□ -0.69
TRAFD1-205ENST00000548277 GOLGA8RI6L899 631 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 UPK1AO00322 258 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 TNFSF11O14788 317 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 HS3ST1O14792 307 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 CLOCKO15516 846 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 RIPK2O43353 540 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 DLX3O60479 287 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 COQ9O75208 318 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 ANGPTL1O95841 491 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 FAM153BP0C7A2 387 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 TIA1P31483 386 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 CDKN1AP38936 164 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 PCYT1AP49585 367 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 CSTF3Q12996 717 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 FGFBP1Q14512 234 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 GANABQ14697 944 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 RASA2Q15283 850 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 GUSBP1Q15486 140 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 ZNHIT3Q15649 155 aaPredicted RBP10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 GRAMD1BQ3KR37 738 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 FAM153CQ494X1 144 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 CYP27C1Q4G0S4 372 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 SPIN4Q56A73 249 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 ZNF678Q5SXM1 525 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 MFSD12Q6NUT3 480 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 GPRIN3Q6ZVF9 776 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 GGNQ86UU5 652 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 SAMD14Q8IZD0 417 aaPredicted RBP10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 ZNF619Q8N2I2 560 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 METTL25Q8N6Q8 603 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 OR10D3Q8NH80 312 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 ROBO4Q8WZ75 1007 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 TMEM237Q96Q45 408 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 RHOXF2Q9BQY4 288 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 GLIPR2Q9H4G4 154 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 Q9N2J8 555 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 YAE1D1Q9NRH1 226 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 DDX18Q9NVP1 670 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 POLR3HQ9Y535 204 aaPredicted RBP10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 AP4B1Q9Y6B7 739 aa10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 SONP18583 2426 aaKnown RBP10.7□□□□□ -0.7
TRAFD1-205ENST00000548277 RNF212BA8MTL3 300 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 MYO1GB0I1T2 1018 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 LINC01387J3KSC0 135 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 SYNGR4O95473 234 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 IL33O95760 270 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 IGKV1D-16P01601 117 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 FCGR2AP12318 317 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 HSD3B1P14060 373 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 IMPDH1P20839 514 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 HSD3B2P26439 372 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 PRKAG1P54619 331 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 RPS4XP62701 263 aaKnown RBP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 KRTAP1-1Q07627 177 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 C17orf67Q0P5P2 114 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 FAPQ12884 760 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 SLC29A2Q14542 456 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 ZNF611Q8N823 705 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 OR6K3Q8NGY3 331 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 FBXO30Q8TB52 745 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 IGFBPL1Q8WX77 278 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 CAVIN3Q969G5 261 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 ELP4Q96EB1 424 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 SH3YL1Q96HL8 342 aaPredicted RBP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 GMPPAQ96IJ6 420 aaPredicted RBP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 KLHDC3Q9BQ90 382 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 MIEF1Q9NQG6 463 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 ZNF701Q9NV72 531 aaPredicted RBP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 FAM120CQ9NX05 1096 aaKnown RBP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 TBK1Q9UHD2 729 aa10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 MRTO4Q9UKD2 239 aaKnown RBP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 MCTS1Q9ULC4 181 aaKnown RBP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 C19orf53Q9UNZ5 99 aaPredicted RBP10.69□□□□□ -0.7
TRAFD1-205ENST00000548277 A0A0J9YW62 118 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms