RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 CDH12P55289 794 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 PRR5P85299 388 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 DCTN2Q13561 401 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 NPTX1Q15818 432 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 TOR1AIP1Q5JTV8 583 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 YOD1Q5VVQ6 348 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 SLC48A1Q6P1K1 146 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 P3H2Q8IVL5 708 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 LGI4Q8N135 537 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 RHOXF1Q8NHV9 184 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 THAP4Q8WY91 577 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 MYDGFQ969H8 173 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 TMEM19Q96HH6 336 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 DHRS1Q96LJ7 313 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 LHPPQ9H008 270 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 TEX10Q9NXF1 929 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 MS4A12Q9NXJ0 267 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 CTSFQ9UBX1 484 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 PHF11Q9UIL8 331 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 MGAT4BQ9UQ53 548 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 LIPT1Q9Y234 373 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 GPC6Q9Y625 555 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 ARGFXA6NJG6 315 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 PTGES3LE9PB15 166 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 PROM1O43490 865 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 AGR2O95994 175 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 OPN1SWP03999 348 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 FHP07954 510 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 HTR1AP08908 422 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 IFI6P09912 130 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 SFTPCP11686 197 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 MATN1P21941 496 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 OR1D4P47884 311 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 CRISP3P54108 245 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 HSPB3Q12988 150 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 ATP1A4Q13733 1029 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 SYT6Q5T7P8 510 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 ZNF793Q6ZN11 406 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 VN1R4Q7Z5H5 301 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 MMP21Q8N119 569 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 SLC5A8Q8N695 610 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 OR2Y1Q8NGV0 311 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 C9orf43Q8TAL5 461 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 SPSB2Q99619 263 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 ZNF71Q9NQZ8 489 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 ACAD8Q9UKU7 415 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 CES1P1Q9UKY3 287 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 TP53TG5Q9Y2B4 290 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 SH3GLB1Q9Y371 365 aa16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 PTRH2Q9Y3E5 179 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 TNRC6AQ8NDV7 1962 aaKnown RBP16.04■□□□□ 0.16
RBFOX1-207ENST00000547338 UBR5O95071 2799 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 SH3D21A4FU49 640 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 FAAHO00519 579 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 EMC8O43402 210 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 ADAP00813 363 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 EIF2S1P05198 315 aaKnown RBP16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 BCHEP06276 602 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 CBLP22681 906 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 ACVR2AP27037 513 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 NCBP2P52298 156 aaKnown RBP eCLIP16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 EMX1Q04741 257 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 EXOC3L2Q2M3D2 409 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 OVCH1Q7RTY7 1134 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 PPP1R32Q7Z5V6 425 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 MRGPREQ86SM8 312 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 ASPGQ86U10 573 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 SHISA5Q8N114 240 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 ZNF540Q8NDQ6 660 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 CNIH3Q8TBE1 160 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 FKBP10Q96AY3 582 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 TM4SF19Q96DZ7 209 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 ALPK1Q96QP1 1244 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 MESP1Q9BRJ9 268 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 SLC26A1Q9H2B4 701 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 TRIM45Q9H8W5 580 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 PLGRKTQ9HBL7 147 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 NDOR1Q9UHB4 597 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 MRPS2Q9Y399 296 aaKnown RBP16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 ZNF780BQ9Y6R6 833 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 MAU2Q9Y6X3 613 aa16.03■□□□□ 0.16
RBFOX1-207ENST00000547338 NUP214P35658 2090 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-207ENST00000547338 NUP210LQ5VU65 1888 aa16.02■□□□□ 0.16
RBFOX1-207ENST00000547338 MYO18BQ8IUG5 2567 aa16.02■□□□□ 0.16
RBFOX1-207ENST00000547338 A0A1W2PR48 441 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 PRAMEF25A6NGN4 478 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 DUXAA6NLW8 204 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 MASP2O00187 686 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 FAM20BO75063 409 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 ATE1O95260 518 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 STATHP02808 62 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 SLC35G6P0C7Q6 338 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 OR1E2P47887 323 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 ST13P50502 369 aaKnown RBP16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 CDC42P60953 191 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 COX10Q12887 443 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 TP53BP2Q13625 1128 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 NDUFA9Q16795 377 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 DUSP7Q16829 419 aa16.02■□□□□ 0.15
RBFOX1-207ENST00000547338 TNFAIP8L2Q6P589 184 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms