RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CMTM6Q9NX76 183 aa11.1□□□□□ -0.63
HDAC7-226ENST00000547259 MYOTQ9UBF9 498 aa11.1□□□□□ -0.63
HDAC7-226ENST00000547259 AP3M1Q9Y2T2 418 aa11.1□□□□□ -0.63
HDAC7-226ENST00000547259 PCDHGB3Q9Y5G1 929 aa11.1□□□□□ -0.63
HDAC7-226ENST00000547259 MTORP42345 2549 aa11.1□□□□□ -0.63
HDAC7-226ENST00000547259 GXYLT2A0PJZ3 443 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 TMEM200CA6NKL6 621 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 A8MVJ9 347 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 HMGN4O00479 90 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 NME4O00746 187 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 ACOX3O15254 700 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 ITGA10O75578 1167 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 OR2J2O76002 312 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 SOX30O94993 753 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 AK1P00568 194 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 BCHEP06276 602 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 NUDT7P0C024 238 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 CT45A8P0DMV1 189 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 CT45A9P0DMV2 189 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 POU3F2P20265 443 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-226ENST00000547259 TRHRP34981 398 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-226ENST00000547259 KRT20P35900 424 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 MAP3K8P41279 467 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 RFX3P48380 749 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 MLF1P58340 268 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 CT45A2Q5DJT8 189 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 H3F3CQ6NXT2 135 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 C16orf47Q6ZP98 133 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-226ENST00000547259 SLC15A3Q8IY34 581 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 PRR22Q8IZ63 422 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 C10orf111Q8N326 155 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 SLC7A6OSQ96CW6 309 aaPredicted RBP11.09□□□□□ -0.63
HDAC7-226ENST00000547259 UTP23Q9BRU9 249 aaKnown RBP11.09□□□□□ -0.63
HDAC7-226ENST00000547259 BTBD10Q9BSF8 475 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 SPATA9Q9BWV2 254 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 BTBD2Q9BX70 525 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 PIF1Q9H611 641 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 THUMPD1Q9NXG2 353 aaKnown RBP11.09□□□□□ -0.63
HDAC7-226ENST00000547259 GIN1Q9NXP7 522 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 TAS2R1Q9NYW7 299 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 ABCD2Q9UBJ2 740 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 P2RX2Q9UBL9 471 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 MRTO4Q9UKD2 239 aaKnown RBP11.09□□□□□ -0.63
HDAC7-226ENST00000547259 CBLCQ9ULV8 474 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 KCNE3Q9Y6H6 103 aa11.09□□□□□ -0.63
HDAC7-226ENST00000547259 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.09□□□□□ -0.63
HDAC7-226ENST00000547259 SPG11Q96JI7 2443 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 FAM220BPB1ANY3 271 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 TO15178 435 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 MAN1A2O60476 641 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 TNFRSF21O75509 655 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 CLDN14O95500 239 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 NADKO95544 446 aaPredicted RBP11.08□□□□□ -0.64
HDAC7-226ENST00000547259 NR2F1P10589 423 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 BMP2P12643 396 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 MST1P26927 711 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 IL12BP29460 328 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 PIGAP37287 484 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 TMED10P49755 219 aaKnown RBP11.08□□□□□ -0.64
HDAC7-226ENST00000547259 SSR4P51571 173 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 EEFSECP57772 596 aaKnown RBP11.08□□□□□ -0.64
HDAC7-226ENST00000547259 NCALDP61601 193 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 MRPS22P82650 360 aaKnown RBP11.08□□□□□ -0.64
HDAC7-226ENST00000547259 ALDH6A1Q02252 535 aaKnown RBP11.08□□□□□ -0.64
HDAC7-226ENST00000547259 LIPEQ05469 1076 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 ZSCAN26Q16670 478 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 DECR1Q16698 335 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 CYP27C1Q4G0S4 372 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 GPAT3Q53EU6 434 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 ACER2Q5QJU3 275 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 DCST2Q5T1A1 773 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 CCNJQ5T5M9 372 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 Q6ZPB1 254 aaPredicted RBP11.08□□□□□ -0.64
HDAC7-226ENST00000547259 SERPINA11Q86U17 422 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 IFNEQ86WN2 208 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 SLC15A4Q8N697 577 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 OR4N2Q8NGD1 307 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 ASB15Q8WXK1 588 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 TMBIM1Q969X1 311 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 OMA1Q96E52 524 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 RASL10BQ96S79 203 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 CDRT15Q96T59 188 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 ALG2Q9H553 416 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 A4GALTQ9NPC4 353 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 TMEM181Q9P2C4 612 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 PRPF19Q9UMS4 504 aaKnown RBP11.08□□□□□ -0.64
HDAC7-226ENST00000547259 LIPT1Q9Y234 373 aa11.08□□□□□ -0.64
HDAC7-226ENST00000547259 YARS2Q9Y2Z4 477 aaKnown RBP11.08□□□□□ -0.64
HDAC7-226ENST00000547259 CSMD2Q7Z408 3487 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 DNAJA2O60884 412 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 REM1O75628 298 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 KCNK2O95069 426 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 F10P00742 488 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 ARAFP10398 606 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 ATP6V1C1P21283 382 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 ABCD3P28288 659 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 GRNP28799 593 aaKnown RBP11.07□□□□□ -0.64
HDAC7-226ENST00000547259 SOX3P41225 446 aa11.07□□□□□ -0.64
HDAC7-226ENST00000547259 GSK3BP49841 420 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms