RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PAK4O96013 591 aaPredicted RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 DHFRP00374 187 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 ALDOBP05062 364 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 CHRM4P08173 479 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 TIMP2P16035 220 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 MRPL19P49406 292 aaKnown RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 RASSF6Q6ZTQ3 369 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 ANKRD53Q8N9V6 530 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 VN1R2Q8NFZ6 395 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 FATE1Q969F0 183 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 HCAR1Q9BXC0 346 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 ZNF346Q9UL40 294 aaKnown RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 H0YIV9 168 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 SOCS5O75159 536 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 LIMS3P0CW19 117 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 LIMS4P0CW20 117 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 CERS1P27544 350 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 KIAA1024LP59773 190 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 SIM1P81133 766 aaPredicted RBP13.73□□□□□ -0.21
HOXC11-202ENST00000546378 ADAM15Q13444 863 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 KCNAB1Q14722 419 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 SIRT6Q8N6T7 355 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 C10orf53Q8N6V4 93 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 OR10G6Q8NH81 332 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 TRMT10AQ8TBZ6 339 aaKnown RBP13.73□□□□□ -0.21
HOXC11-202ENST00000546378 ZMYND19Q96E35 227 aaPredicted RBP13.73□□□□□ -0.21
HOXC11-202ENST00000546378 MCHR1Q99705 422 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 P2RX2Q9UBL9 471 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 ZNF69Q9UC07 566 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 POLHQ9Y253 713 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 OR2W5A6NFC9 320 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 CEBPBP17676 345 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 OR12D2P58182 307 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 RHAGQ02094 409 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 AGERQ15109 404 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 FAM71E1Q6IPT2 247 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 GET4Q7L5D6 327 aaPredicted RBP13.73□□□□□ -0.21
HOXC11-202ENST00000546378 OR52E4Q8NGH9 312 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 SEC22CQ9BRL7 303 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 GINS4Q9BRT9 223 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 NKX2-4Q9H2Z4 354 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 FKRPQ9H9S5 495 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 ASIC5Q9NY37 505 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 CNOT2Q9NZN8 540 aaKnown RBP13.73□□□□□ -0.21
HOXC11-202ENST00000546378 YBX2Q9Y2T7 364 aaKnown RBP13.73□□□□□ -0.21
HOXC11-202ENST00000546378 TRPM6Q9BX84 2022 aa13.73□□□□□ -0.21
HOXC11-202ENST00000546378 SH3D21A4FU49 640 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 FAAHO00519 579 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 CFDP00746 253 aaPredicted RBP13.72□□□□□ -0.21
HOXC11-202ENST00000546378 TRHRP34981 398 aaPredicted RBP13.72□□□□□ -0.21
HOXC11-202ENST00000546378 GLYR1Q49A26 553 aaPredicted RBP13.72□□□□□ -0.21
HOXC11-202ENST00000546378 PARS2Q7L3T8 475 aaKnown RBP13.72□□□□□ -0.21
HOXC11-202ENST00000546378 GDPD1Q8N9F7 314 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 OR8S1Q8NH09 359 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ZFAND1Q8TCF1 268 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ABHD1Q96SE0 405 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 PDCD1LG2Q9BQ51 273 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 TAPBPLQ9BX59 468 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 LGR4Q9BXB1 951 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 CHST8Q9H2A9 424 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 GLIPR2Q9H4G4 154 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 CACYBPQ9HB71 228 aaKnown RBP13.72□□□□□ -0.21
HOXC11-202ENST00000546378 GLTPQ9NZD2 209 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 SLC7A7Q9UM01 511 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 SCML1Q9UN30 329 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ADH7P40394 386 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 TGM3Q08188 693 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 DSG2Q14126 1118 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 BEX5Q5H9J7 111 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 SLX4IPQ5VYV7 408 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 SLC36A4Q6YBV0 504 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 SLC9B2Q86UD5 537 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 KLHL36Q8N4N3 616 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ZNF354BQ96LW1 612 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 TMEM138Q9NPI0 162 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 AHSPQ9NZD4 102 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ENOPH1Q9UHY7 261 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 FXYD6-FXYD2A0A087WZ82 144 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 PROM1O43490 865 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 PRICKLE3O43900 615 aaPredicted RBP13.72□□□□□ -0.21
HOXC11-202ENST00000546378 HLA-DPB1P04440 258 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 STOMP27105 288 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ACSL1P33121 698 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ETV6P41212 452 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 EPHA5P54756 1037 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 DUSP2Q05923 314 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ILKQ13418 452 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ASAH1Q13510 395 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 MELKQ14680 651 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 CDC73Q6P1J9 531 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 NR2C2APQ86WQ0 139 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 PFN4Q8NHR9 129 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 ADAMTS15Q8TE58 950 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 RNF170Q96K19 258 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 DDOQ99489 341 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 FUZQ9BT04 418 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 EFCAB11Q9BUY7 163 aa13.72□□□□□ -0.21
HOXC11-202ENST00000546378 NXF2Q9GZY0 626 aaKnown RBP13.72□□□□□ -0.21
HOXC11-202ENST00000546378 FXYD6Q9H0Q3 95 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms