RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 C15orf40Q8WUR7 153 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ACOT11Q8WXI4 607 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TM9SF4Q92544 642 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 HGDQ93099 445 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 NUS1Q96E22 293 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ZFYVE19Q96K21 471 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 MRGPRX3Q96LB0 322 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TOX2Q96NM4 488 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 AMDHD1Q96NU7 426 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ATF6BQ99941 703 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ZDHHC5Q9C0B5 715 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 OR52A5Q9H2C5 316 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 RANGRFQ9HD47 186 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TRIM36Q9NQ86 728 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 SLC35C2Q9NQQ7 365 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 LYARQ9NX58 379 aaKnown RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TAS2R16Q9NYV7 291 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 H2AFY2Q9P0M6 372 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 NTMQ9P121 344 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 NUFIP1Q9UHK0 495 aaKnown RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CD84Q9UIB8 345 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 MBD1Q9UIS9 605 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 NUP50Q9UKX7 468 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 NDRG2Q9UN36 371 aaKnown RBP6.06□□□□□ -1.44
SNHG1-225ENST00000545920 CLCA2Q9UQC9 943 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TMEM5Q9Y2B1 443 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 SLC27A6Q9Y2P4 619 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 NUBP2Q9Y5Y2 271 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 ALG5Q9Y673 324 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 PLXNA2O75051 1894 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 PLXNA4Q9HCM2 1894 aa6.06□□□□□ -1.44
SNHG1-225ENST00000545920 TBC1D3KA0A087X1G2 549 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TRBV23-1A0A0A0MS06 115 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 A0A0A6YYD5 115 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TRAV1-2A0A0B4J238 106 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 EDDM13A0A1B0GTR0 161 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TBC1D3BA6NDS4 549 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TBC1D3FA6NER0 549 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 A8MU76 341 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 B8ZZF3 427 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 GABRPO00591 440 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 AP3D1O14617 1153 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TFECO14948 347 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 CTDSPLO15194 276 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TEX28O15482 410 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF749O43361 778 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 EMC8O43402 210 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 SSX4O60224 188 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 PRAF2O60831 178 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 NOS1APO75052 506 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 PEX14O75381 377 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 MTX2O75431 263 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 POP7O75817 140 aaKnown RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 SOX14O95416 240 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 GUSBP08236 651 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 PSKH1P11801 424 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TYRP14679 529 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ARSBP15848 533 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 SYN1P17600 705 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 CSNK2A2P19784 350 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 NPR2P20594 1047 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 STOMP27105 288 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 PDHA2P29803 388 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 AHRP35869 848 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 GPR1P46091 355 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 OR3A3P47888 321 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 MAN2A2P49641 1150 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TAS2R41P59536 307 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 RPS25P62851 125 aaKnown RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ACTC1P68032 377 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ACTA1P68133 377 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 CYP4F8P98187 520 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 FABP5Q01469 135 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 DMPKQ09013 629 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 BAMBIQ13145 260 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 DYRK1AQ13627 763 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 IL18Q14116 193 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 SLC9A5Q14940 896 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 RSPO4Q2I0M5 234 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 PGGHGQ32M88 737 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 LEXMQ3ZCV2 418 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 CCSMST1Q4G0I0 132 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 KLHL12Q53G59 568 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ZMAT1Q5H9K5 638 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 FAM209AQ5JX71 171 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 SPOUT1Q5T280 376 aaKnown RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 SLC22A10Q63ZE4 541 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TBC1D3GQ6DHY5 549 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 OR4C11Q6IEV9 310 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ZNF322Q6U7Q0 402 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 IDO2Q6ZQW0 420 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 MBOAT2Q6ZWT7 520 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ERN2Q76MJ5 926 aaKnown RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ANKRD33Q7Z3H0 272 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 TRMT11Q7Z4G4 463 aaKnown RBP6.05□□□□□ -1.44
SNHG1-225ENST00000545920 ADCK2Q7Z695 626 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 FGD2Q7Z6J4 655 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 IQCHQ86VS3 1027 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 AMZ2Q86W34 360 aa6.05□□□□□ -1.44
SNHG1-225ENST00000545920 MARCH9Q86YJ5 346 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms