RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 SAP130Q9H0E3 1048 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL4A6-209ENST00000545689 EPHX3Q9H6B9 360 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 ENY2Q9NPA8 101 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 FZD3Q9NPG1 666 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 NLKQ9UBE8 527 aa11.81□□□□□ -0.52
COL4A6-209ENST00000545689 F5H0A9 414 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ANKRD28O15084 1053 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 HMGN2P05204 90 aaKnown RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 CDK4P11802 303 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 TAS2R31P59538 309 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 PGBD5Q8N414 524 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 NELFAQ9H3P2 528 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 TAS2R3Q9NYW6 316 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 TESQ9UGI8 421 aaKnown RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF443Q9Y2A4 671 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 A0A1W2PPK0 400 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 AP1G1O43747 822 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 CEBPBP17676 345 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 MALLQ13021 153 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 CDK10Q15131 360 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 NKAPLQ5M9Q1 402 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 FAM198BQ6UWH4 519 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 UNQ6126/PRO20091Q6UXV3 157 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 TPRA1Q86W33 373 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 UEVLDQ8IX04 471 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 PHC2Q8IXK0 858 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 PM20D2Q8IYS1 436 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ARL14Q8N4G2 192 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 MFSD9Q8NBP5 474 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 IL37Q9NZH6 218 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 CNIH4Q9P003 139 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 PPP6CO00743 305 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 MAS1P04201 325 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ADH6P28332 368 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 RPL34P49207 117 aaKnown RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 CTSCP53634 463 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 COL28A1Q2UY09 1125 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 FRMPD2BQ6IN97 320 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM53Q6P2H8 277 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 RNF113BQ8IZP6 322 aaKnown RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 GPR148Q8TDV2 347 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ALOXE3Q9BYJ1 711 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 H3BSH0 61 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 H7C2Y5 167 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 CDK2P24941 298 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 CD34P28906 385 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 CYCSP99999 105 aaKnown RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ACY1Q03154 408 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 PGGHGQ32M88 737 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 GARNL3Q5VVW2 1013 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 METAP1DQ6UB28 335 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF852Q6ZMS4 543 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 GGHQ92820 318 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 SLC6A7Q99884 636 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM185BQ9H7F4 350 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 NT5DC2Q9H857 520 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF701Q9NV72 531 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 KRBA1A5PL33 1030 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 OR2T1O43869 369 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 DIRAS3O95661 229 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 HIST1H1TP22492 207 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 C1orf61Q13536 156 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 NNATQ16517 81 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 FBXO46Q6PJ61 603 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ZC3H14Q6PJT7 736 aaKnown RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 MEPCEQ7L2J0 689 aaKnown RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 OR5K2Q8NHB8 316 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 SPRYD4Q8WW59 207 aaPredicted RBP11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ADAMTS14Q8WXS8 1223 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 SLC46A2Q9BY10 475 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 TMPRSS11EQ9UL52 423 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 BTAF1O14981 1849 aa11.8□□□□□ -0.52
COL4A6-209ENST00000545689 ACOT7O00154 380 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 MFSD6LQ8IWD5 586 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 DEFB119Q8N690 84 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 BORCS8Q96FH0 119 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF587Q96SQ5 575 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-209ENST00000545689 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 FTCDNL1E5RQL4 147 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 EGFP01133 1207 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 JMJD7P0C870 316 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 UGT2B7P16662 529 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 RELAQ04206 551 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 HAGHLQ6PII5 290 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-209ENST00000545689 MAVSQ7Z434 540 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 WDR53Q7Z5U6 358 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-209ENST00000545689 KIF18BQ86Y91 864 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM151BQ8IW70 566 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 PDZD9Q8IXQ8 264 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 LRRC56Q8IYG6 542 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-209ENST00000545689 TRIM43Q96BQ3 446 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-209ENST00000545689 OR7D2Q96RA2 312 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 ARL6Q9H0F7 186 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 OR51E2Q9H255 320 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 ACOT8O14734 319 aa11.79□□□□□ -0.52
COL4A6-209ENST00000545689 SC5DO75845 299 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms