RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SEMA7AO75326 666 aa28.1■■■□□ 2.09
CCM2-219ENST00000544363 NOVA1P51513 510 aaKnown RBP28.1■■■□□ 2.09
CCM2-219ENST00000544363 NR0B1P51843 470 aaKnown RBP28.1■■■□□ 2.09
CCM2-219ENST00000544363 PSMD4P55036 377 aaKnown RBP28.1■■■□□ 2.09
CCM2-219ENST00000544363 DAG1Q14118 895 aa28.1■■■□□ 2.09
CCM2-219ENST00000544363 PCOLCEQ15113 449 aa28.1■■■□□ 2.09
CCM2-219ENST00000544363 ZNF141Q15928 474 aa28.1■■■□□ 2.09
CCM2-219ENST00000544363 HSPBAP1Q96EW2 488 aa28.1■■■□□ 2.09
CCM2-219ENST00000544363 KCND3Q9UK17 655 aa28.1■■■□□ 2.09
CCM2-219ENST00000544363 RIF1Q5UIP0 2472 aaKnown RBP28.1■■■□□ 2.09
CCM2-219ENST00000544363 ZNF292O60281 2723 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 FFAR1O14842 300 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 HSPA13P48723 471 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 ATP12AP54707 1039 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 CDH12P55289 794 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 NHLH1Q02575 133 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 PDZK1Q5T2W1 519 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 MAGEE2Q8TD90 523 aaPredicted RBP28.09■■■□□ 2.09
CCM2-219ENST00000544363 EFHD2Q96C19 240 aaPredicted RBP28.09■■■□□ 2.09
CCM2-219ENST00000544363 ZNF700Q9H0M5 742 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 ARMC7Q9H6L4 198 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 ACER3Q9NUN7 267 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 ACAD8Q9UKU7 415 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 TCFL5Q9UL49 500 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 FARSAQ9Y285 508 aaKnown RBP28.09■■■□□ 2.09
CCM2-219ENST00000544363 HS3ST3B1Q9Y662 390 aa28.09■■■□□ 2.09
CCM2-219ENST00000544363 ACADSP16219 412 aa28.08■■■□□ 2.09
CCM2-219ENST00000544363 MMP11P24347 488 aa28.08■■■□□ 2.09
CCM2-219ENST00000544363 ALDH3A2P51648 485 aa28.08■■■□□ 2.09
CCM2-219ENST00000544363 GANABQ14697 944 aaKnown RBP28.08■■■□□ 2.09
CCM2-219ENST00000544363 NPTX1Q15818 432 aa28.08■■■□□ 2.09
CCM2-219ENST00000544363 MRPL2Q5T653 305 aaKnown RBP28.08■■■□□ 2.09
CCM2-219ENST00000544363 NLGN4XQ8N0W4 816 aa28.08■■■□□ 2.09
CCM2-219ENST00000544363 NLGN4YQ8NFZ3 816 aaPredicted RBP28.08■■■□□ 2.09
CCM2-219ENST00000544363 OR8K3Q8NH51 312 aa28.08■■■□□ 2.09
CCM2-219ENST00000544363 TP53INP1Q96A56 240 aa28.08■■■□□ 2.09
CCM2-219ENST00000544363 GABARAPL1Q9H0R8 117 aa28.08■■■□□ 2.09
CCM2-219ENST00000544363 IGHV1-45A0A0A0MS14 117 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 CDC14CA4D256 554 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 FRS3O43559 492 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 HMGA2P52926 109 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 RGS8P57771 180 aaPredicted RBP28.07■■■□□ 2.08
CCM2-219ENST00000544363 PSPHP78330 225 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 MARCH9Q86YJ5 346 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 OR4C15Q8NGM1 316 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 NUBPLQ8TB37 319 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 DIO2Q92813 273 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 BARD1Q99728 777 aaKnown RBP28.07■■■□□ 2.08
CCM2-219ENST00000544363 RBM4BQ9BQ04 359 aaKnown RBP28.07■■■□□ 2.08
CCM2-219ENST00000544363 RBM4Q9BWF3 364 aaKnown RBP28.07■■■□□ 2.08
CCM2-219ENST00000544363 OSBPL10Q9BXB5 764 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 POLR1BQ9H9Y6 1135 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 A4GNTQ9UNA3 340 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 WDFY3Q8IZQ1 3526 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 TRBV11-1A0A0K0K1C0 115 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 CDHR4A6H8M9 788 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 HPRP00739 348 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 ALPLP05186 524 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 PRKACGP22612 351 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 RPS15P62841 145 aaKnown RBP28.07■■■□□ 2.08
CCM2-219ENST00000544363 GK3PQ14409 553 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 LAPTM4AQ15012 233 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 SLC34A3Q8N130 599 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 HOXD1Q9GZZ0 328 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 ST6GALNAC1Q9NSC7 600 aaPredicted RBP28.07■■■□□ 2.08
CCM2-219ENST00000544363 USE1Q9NZ43 259 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 PDP1Q9P0J1 537 aaPredicted RBP28.07■■■□□ 2.08
CCM2-219ENST00000544363 RHCGQ9UBD6 479 aa28.07■■■□□ 2.08
CCM2-219ENST00000544363 GADD45GO95257 159 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 COX6A1P12074 109 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 LCN1P31025 176 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 GABREP78334 506 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 PPP2R2BQ00005 443 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 CMPK2Q5EBM0 449 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 WLSQ5T9L3 541 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 PRR22Q8IZ63 422 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 ZNF614Q8N883 585 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 OR4C3Q8NH37 302 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 OR52J3Q8NH60 311 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 PHF10Q8WUB8 498 aaKnown RBP28.06■■■□□ 2.08
CCM2-219ENST00000544363 OIT3Q8WWZ8 545 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 DHRS1Q96LJ7 313 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 NMNAT1Q9HAN9 279 aaPredicted RBP28.06■■■□□ 2.08
CCM2-219ENST00000544363 SMURF2Q9HAU4 748 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 RAB26Q9ULW5 256 aa28.06■■■□□ 2.08
CCM2-219ENST00000544363 DLL1O00548 723 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 DLGAP1O14490 977 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 SLC30A4O14863 429 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 REM1O75628 298 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 UQCRBP14927 111 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 LIMS1P48059 325 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 RPS18P62269 152 aaKnown RBP28.05■■■□□ 2.08
CCM2-219ENST00000544363 PIN1Q13526 163 aaPredicted RBP28.05■■■□□ 2.08
CCM2-219ENST00000544363 COLEC12Q5KU26 742 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 KIRREL2Q6UWL6 708 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 OR5L2Q8NGL0 311 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 ADAMTS14Q8WXS8 1223 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 PRRC1Q96M27 445 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 EVA1AQ9H8M9 152 aa28.05■■■□□ 2.08
CCM2-219ENST00000544363 A0A1W2PQ72 361 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms