RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ZNHIT1O43257 154 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 FCMRO60667 390 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 UBR5O95071 2799 aaPredicted RBP13.77□□□□□ -0.21
CD9-210ENST00000543916 GNLYP22749 145 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 GDF1P27539 372 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 CRATP43155 626 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 MAGEA8P43361 318 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 TXNL4AP83876 142 aaKnown RBP13.77□□□□□ -0.21
CD9-210ENST00000543916 HSF1Q00613 529 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 STX5Q13190 355 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 SYPL1Q16563 259 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 FLYWCH1Q4VC44 716 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 ATAD3BQ5T9A4 648 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 OR5M10Q6IEU7 315 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 BNC2Q6ZN30 1099 aaPredicted RBP13.77□□□□□ -0.21
CD9-210ENST00000543916 TREML1Q86YW5 311 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 C10orf111Q8N326 155 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 ROPN1LQ96C74 230 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 CCT8L2Q96SF2 557 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 CPPED1Q9BRF8 314 aaPredicted RBP13.77□□□□□ -0.21
CD9-210ENST00000543916 TBL1XR1Q9BZK7 514 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 ZNF350Q9GZX5 532 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 MYLK2Q9H1R3 596 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 UBQLN3Q9H347 655 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 IKZF5Q9H5V7 419 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 UBQLN4Q9NRR5 601 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 MKLN1Q9UL63 735 aa13.77□□□□□ -0.21
CD9-210ENST00000543916 CENPVL1A0A0U1RR11 272 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 LOC100653049A0A140TA62 436 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 ANKUB1A6NFN9 424 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 ALG1L2C9J202 215 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 CDC40O60508 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
CD9-210ENST00000543916 STX11O75558 287 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 KRT34O76011 436 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 PDE9AO76083 593 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 ANGPTL1O95841 491 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 CHRM4P08173 479 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 ELAVL4P26378 380 aaKnown RBP13.76□□□□□ -0.21
CD9-210ENST00000543916 DCTP40126 519 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 RNF144AP50876 292 aaPredicted RBP13.76□□□□□ -0.21
CD9-210ENST00000543916 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
CD9-210ENST00000543916 DSTNP60981 165 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 NFYCQ13952 458 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 RGNQ15493 299 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 MAPRE2Q15555 327 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 MAPK11Q15759 364 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 GPAT3Q53EU6 434 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 REP15Q6BDI9 236 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 GFRALQ6UXV0 394 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 FRRS1Q6ZNA5 592 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 FGD2Q7Z6J4 655 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 ATCAYQ86WG3 371 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 PLCZ1Q86YW0 608 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 CHERPQ8IWX8 916 aaKnown RBP13.76□□□□□ -0.21
CD9-210ENST00000543916 POU5F2Q8N7G0 328 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 ANKFN1Q8N957 763 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 GATSQ8NAP1 163 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 CGREF1Q99674 301 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 TRIM8Q9BZR9 551 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 PPP4R1LQ9P1A2 415 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 B4GALT7Q9UBV7 327 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.76□□□□□ -0.21
CD9-210ENST00000543916 KCNE5Q9UJ90 142 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 FBXL2Q9UKC9 423 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 GMEB1Q9Y692 573 aa13.76□□□□□ -0.21
CD9-210ENST00000543916 TENM4Q6N022 2769 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 A0A1W2PQD3 144 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 BBIP1A8MTZ0 92 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 SCDO00767 359 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 MRASO14807 208 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 KIAA0513O60268 411 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 H6PDO95479 791 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 FAM107AO95990 144 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 IGHG3P01860 377 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 NUDT7P0C024 238 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 PPIBP23284 216 aaKnown RBP13.75□□□□□ -0.21
CD9-210ENST00000543916 CLK3P49761 638 aaKnown RBP13.75□□□□□ -0.21
CD9-210ENST00000543916 ATP12AP54707 1039 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 CYLC2Q14093 348 aaPredicted RBP13.75□□□□□ -0.21
CD9-210ENST00000543916 SELPLGQ14242 412 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 CAPRIN1Q14444 709 aaKnown RBP13.75□□□□□ -0.21
CD9-210ENST00000543916 GPR68Q15743 365 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 CD226Q15762 336 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 KLHL26Q53HC5 615 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 KRTCAP3Q53RY4 240 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 RUNDC3AQ59EK9 446 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 COQ5Q5HYK3 327 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 TYW3Q6IPR3 259 aaKnown RBP13.75□□□□□ -0.21
CD9-210ENST00000543916 SPPL2CQ8IUH8 684 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 GHDCQ8N2G8 530 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 FADS6Q8N9I5 356 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 DUSP19Q8WTR2 217 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 ANKRD27Q96NW4 1050 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 TRNT1Q96Q11 434 aaKnown RBP13.75□□□□□ -0.21
CD9-210ENST00000543916 SAP130Q9H0E3 1048 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 SLC38A1Q9H2H9 487 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 SLC6A15Q9H2J7 730 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 RAD21L1Q9H4I0 556 aa13.75□□□□□ -0.21
CD9-210ENST00000543916 RUBCNLQ9H714 662 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms