RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	DNAJC11	Q9NVH1	559 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	CRIM1	Q9NZV1	1036 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	ABCD2	Q9UBJ2	740 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	DAPK2	Q9UIK4	370 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	PACSIN3	Q9UKS6	424 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	CBLC	Q9ULV8	474 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	DAPP1	Q9UN19	280 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	RNF6	Q9Y252	685 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	DYRK1B	Q9Y463	629 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	CORIN	Q9Y5Q5	1042 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	SNX13	Q9Y5W8	968 aa		5.91	□□□□□ -1.46
CIT-213	ENST00000543324	ISPD	A4D126	451 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	PRORSD1P	A6NEY8	169 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	MBD3L5	A6NJ08	208 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SAC3D1	A6NKF1	404 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SDHD	O14521	159 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ACOX3	O15254	700 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CLOCK	O15516	846 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CFLAR	O15519	480 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	TPD52L2	O43399	206 aa	Known RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ERI3	O43414	337 aa	Known RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	PRKN	O60260	465 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	B4GALT2	O60909	372 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	KERA	O60938	352 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	STK16	O75716	305 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SLC25A12	O75746	678 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SP1	P08047	785 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	STMN1	P16949	149 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	FAS	P25445	335 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CERS1	P27544	350 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	PPP2R1B	P30154	601 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	HPCAL1	P37235	193 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	KIR2DL3	P43628	341 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	HSPA7	P48741	367 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	PCYT1A	P49585	367 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ARFIP1	P53367	373 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	LIM2	P55344	173 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	GALNT1	Q10472	559 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	TOP3A	Q13472	1001 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	DOC2A	Q14183	400 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CAPRIN1	Q14444	709 aa	Known RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	KRTCAP3	Q53RY4	240 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	FBXO48	Q5FWF7	155 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	COQ5	Q5HYK3	327 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	MFSD4B	Q5TF39	518 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	LIPN	Q5VXI9	398 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SPINK14	Q6IE38	97 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	C3P1	Q6ZMU1	363 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	GALNTL5	Q7Z4T8	443 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CMC1	Q7Z7K0	106 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	RPS19BP1	Q86WX3	136 aa	Known RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	DHFR2	Q86XF0	187 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	DOLPP1	Q86YN1	238 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	GPSM1	Q86YR5	675 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	EPHX4	Q8IUS5	362 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ZNF595	Q8IYB9	648 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CADM3	Q8N126	398 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	EID3	Q8N140	333 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	KRT78	Q8N1N4	520 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SPATA6L	Q8N4H0	392 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	TMEM151A	Q8N4L1	468 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	DHRSX	Q8N5I4	330 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	C3orf56	Q8N813	242 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ZFP62	Q8NB50	900 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	C16orf52	Q8NHV5	167 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	RHEBL1	Q8TAI7	183 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SUN3	Q8TAQ9	357 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	PTPMT1	Q8WUK0	201 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ESAM	Q96AP7	390 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CENPN	Q96H22	339 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	PTCHD1	Q96NR3	888 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	RDH12	Q96NR8	316 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SERINC2	Q96SA4	455 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CIB1	Q99828	191 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	EGFL8	Q99944	293 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	HOPX	Q9BPY8	73 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CD244	Q9BZW8	370 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	REXO4	Q9GZR2	422 aa	Known RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SEMA6A	Q9H2E6	1030 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	CDCP1	Q9H5V8	836 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	NOL11	Q9H8H0	719 aa	Known RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	LYRM4	Q9HD34	91 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ADAP2	Q9NPF8	381 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ANKRD10	Q9NXR5	420 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	QPCTL	Q9NXS2	382 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	SMPD3	Q9NY59	655 aa	Predicted RBP	5.9	□□□□□ -1.46
CIT-213	ENST00000543324	NUDT4	Q9NZJ9	180 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	ADA2	Q9NZK5	511 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	TXNDC16	Q9P2K2	825 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	TRAF6	Q9Y4K3	522 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	NOX1	Q9Y5S8	564 aa		5.9	□□□□□ -1.46
CIT-213	ENST00000543324	NIN	Q8N4C6	2090 aa		5.9	□□□□□ -1.47
CIT-213	ENST00000543324	KIAA1549	Q9HCM3	1950 aa		5.89	□□□□□ -1.47
CIT-213	ENST00000543324		A0A096LPK6	155 aa		5.89	□□□□□ -1.47
CIT-213	ENST00000543324		A0A0G2JN53	185 aa		5.89	□□□□□ -1.47
CIT-213	ENST00000543324	DHRS12	A0PJE2	317 aa		5.89	□□□□□ -1.47
CIT-213	ENST00000543324	PABPN1L	A6NDY0	278 aa	Known RBP	5.89	□□□□□ -1.47
CIT-213	ENST00000543324	NCF1B	A6NI72	391 aa	Predicted RBP	5.89	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms