RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 ABCG2Q9UNQ0 655 aa15.7■□□□□ 0.1
LIG1-204ENST00000542460 PCDHGA10Q9Y5H3 936 aa15.7■□□□□ 0.1
LIG1-204ENST00000542460 PIEZO2Q9H5I5 2752 aa15.7■□□□□ 0.1
LIG1-204ENST00000542460 A0A0G2JPF8 293 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 PRAMEF25A6NGN4 478 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 HNRNPCL2B2RXH8 293 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 HNRNPCL3B7ZW38 293 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 KLRC4-KLRK1H3BQV0 150 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 NME4O00746 187 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 ATXN7O15265 892 aaPredicted RBP15.69■□□□□ 0.1
LIG1-204ENST00000542460 KIAA0513O60268 411 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 FADS1O60427 444 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 HNRNPCL1O60812 293 aaKnown RBP15.69■□□□□ 0.1
LIG1-204ENST00000542460 HNRNPCL4P0DMR1 293 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 HPGDP15428 266 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 EVI2BP34910 448 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 CPOXP36551 454 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 ATP12AP54707 1039 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 CHRNEQ04844 493 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 BNIP1Q12981 228 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 SCARB2Q14108 478 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 GRAMD1BQ3KR37 738 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 PLEKHN1Q494U1 663 aaPredicted RBP15.69■□□□□ 0.1
LIG1-204ENST00000542460 PRAMEF20Q5VT98 475 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 SLC6A19Q695T7 634 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 REEP3Q6NUK4 255 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 SLC30A6Q6NXT4 461 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 OLIG3Q7RTU3 272 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 GALNTL5Q7Z4T8 443 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 DEFB107AQ8IZN7 70 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 ZNF619Q8N2I2 560 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 ZNF527Q8NB42 609 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 NFKBIDQ8NI38 313 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 PNPLA2Q96AD5 504 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 REXO5Q96IC2 774 aaKnown RBP15.69■□□□□ 0.1
LIG1-204ENST00000542460 TREX2Q9BQ50 279 aaPredicted RBP15.69■□□□□ 0.1
LIG1-204ENST00000542460 RUBCNLQ9H714 662 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 BCL2L10Q9HD36 194 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 KLRF1Q9NZS2 232 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 FLRT3Q9NZU0 649 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 TMEM181Q9P2C4 612 aa15.69■□□□□ 0.1
LIG1-204ENST00000542460 NPIPB9F8W1W9 429 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 EBAG9O00559 213 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 SCDO00767 359 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 PEX1O43933 1283 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 SNX4O95219 450 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 ZIC2O95409 532 aaPredicted RBP15.68■□□□□ 0.1
LIG1-204ENST00000542460 OXSR1O95747 527 aaPredicted RBP15.68■□□□□ 0.1
LIG1-204ENST00000542460 DCTP40126 519 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 EEFSECP57772 596 aaKnown RBP15.68■□□□□ 0.1
LIG1-204ENST00000542460 LIPEQ05469 1076 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 KLRB1Q12918 225 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 ZNF141Q15928 474 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 NADK2Q4G0N4 442 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 BICRALQ6AI39 1079 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 RPUSD3Q6P087 351 aaKnown RBP15.68■□□□□ 0.1
LIG1-204ENST00000542460 ERICH5Q6P6B1 374 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 RINLQ6ZS11 566 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 SLC30A8Q8IWU4 369 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 SULF2Q8IWU5 870 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 ZZZ3Q8IYH5 903 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 POGLUT1Q8NBL1 392 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 HIPK4Q8NE63 616 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 OR2T12Q8NG77 320 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 OIT3Q8WWZ8 545 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 FAM173AQ9BQD7 235 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 DOHHQ9BU89 302 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 TBL1XR1Q9BZK7 514 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 DEPPQ9NTK1 212 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 TAS2R1Q9NYW7 299 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 ADA2Q9NZK5 511 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 FAM220BPB1ANY3 271 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 ALG1L2C9J202 215 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 DNAJA2O60884 412 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 UGT2B17O75795 530 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 ATP5HO75947 161 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 PGM3O95394 542 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 PTGDSP41222 190 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 GPR85P60893 370 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 KCNJ2P63252 427 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 VMACQ2NL98 169 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 KLHL26Q53HC5 615 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 PACS2Q86VP3 889 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 IFNEQ86WN2 208 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 FAM98AQ8NCA5 519 aaKnown RBP15.68■□□□□ 0.1
LIG1-204ENST00000542460 BBS10Q8TAM1 723 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 SLC39A7Q92504 469 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 NTNG2Q96CW9 530 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 CDRT15Q96T59 188 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 OSBPL11Q9BXB4 747 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 ALG2Q9H553 416 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 PROK2Q9HC23 129 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 SUCOQ9UBS9 1254 aaKnown RBP15.68■□□□□ 0.1
LIG1-204ENST00000542460 ANGPT4Q9Y264 503 aa15.68■□□□□ 0.1
LIG1-204ENST00000542460 TNRC6AQ8NDV7 1962 aaKnown RBP15.67■□□□□ 0.1
LIG1-204ENST00000542460 DSPPQ9NZW4 1301 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 NPIPA5A0A0B4J1W7 369 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 A0A1W2PQD3 144 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 NPIPA7E9PJI5 369 aa15.67■□□□□ 0.1
LIG1-204ENST00000542460 G3V3Y1 287 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms