RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PDLIM5Q96HC4 596 aaKnown RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 DNAJC7Q99615 494 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 ACSS1Q9NUB1 689 aaPredicted RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 C20orf96Q9NUD7 363 aaPredicted RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 MED11Q9P086 117 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 NTMQ9P121 344 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 MRTO4Q9UKD2 239 aaKnown RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 ZNF490Q9ULM2 529 aaPredicted RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 CORINQ9Y5Q5 1042 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 LOC105371242A0A075B767 164 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 GOLGA6L10A0A0M3HER8 536 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 GLOD5A6NK44 160 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 TNFSF11O14788 317 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 PRSS23O95084 383 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 RNASE1P07998 156 aaKnown RBP8.28□□□□□ -1.08
YBX3-211ENST00000541351 CT62P0C5K7 136 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 FAM58BPP0C7Q3 252 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 PCNAP12004 261 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 CPMP14384 443 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 COX5AP20674 150 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 PAX7P23759 505 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 SLC1A3P43003 542 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 TERF1P54274 439 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 GAS1P54826 345 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 NAP1L1P55209 391 aaKnown RBP8.28□□□□□ -1.08
YBX3-211ENST00000541351 RAB10P61026 200 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 SPOCK1Q08629 439 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 ZNHIT3Q15649 155 aaPredicted RBP8.28□□□□□ -1.08
YBX3-211ENST00000541351 TBCCQ15814 346 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 ZNF239Q16600 458 aaKnown RBP8.28□□□□□ -1.08
YBX3-211ENST00000541351 LGSNQ5TDP6 509 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 SYT10Q6XYQ8 523 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 Q6ZPA2 131 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 FCRLAQ7L513 359 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 NUFIP2Q7Z417 695 aaKnown RBP8.28□□□□□ -1.08
YBX3-211ENST00000541351 ZNF100Q8IYN0 542 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 CEP112Q8N8E3 955 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 OR5M1Q8NGP8 315 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 OR52N5Q8NH56 324 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 MRAPQ8TCY5 172 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 UBASH3BQ8TF42 649 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 ABHD3Q8WU67 409 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 RNF138Q8WVD3 245 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 OSTF1Q92882 214 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 ADGRG7Q96K78 797 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 BEX1Q9HBH7 125 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 LPAR2Q9HBW0 351 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 IARS2Q9NSE4 1012 aaKnown RBP8.28□□□□□ -1.08
YBX3-211ENST00000541351 PSME2Q9UL46 239 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 MOKQ9UQ07 419 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 GPR55Q9Y2T6 319 aaPredicted RBP8.28□□□□□ -1.08
YBX3-211ENST00000541351 OR10H1Q9Y4A9 318 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 OARD1Q9Y530 152 aa8.28□□□□□ -1.08
YBX3-211ENST00000541351 SAP18O00422 153 aaKnown RBP8.27□□□□□ -1.09
YBX3-211ENST00000541351 TSPAN2O60636 221 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 GUCY1B2O75343 617 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 ATP1B1P05026 303 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 SAGP10523 405 aaPredicted RBP8.27□□□□□ -1.09
YBX3-211ENST00000541351 ADRA2CP18825 462 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 MAGEA1P43355 309 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 PSMD4P55036 377 aaKnown RBP8.27□□□□□ -1.09
YBX3-211ENST00000541351 LOXL3P58215 753 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 MYBPC1Q00872 1141 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 C17orf67Q0P5P2 114 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 STX5Q13190 355 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 RIN1Q13671 783 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 OASLQ15646 514 aaKnown RBP8.27□□□□□ -1.09
YBX3-211ENST00000541351 EFNB3Q15768 340 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 PDK4Q16654 411 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 ERCC6LQ2NKX8 1250 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 REP15Q6BDI9 236 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 FAM111BQ6SJ93 734 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 LUZP1Q86V48 1076 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 NUDT13Q86X67 352 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 GTPBP8Q8N3Z3 284 aaPredicted RBP8.27□□□□□ -1.09
YBX3-211ENST00000541351 NKAPQ8N5F7 415 aaKnown RBP8.27□□□□□ -1.09
YBX3-211ENST00000541351 CDYL2Q8N8U2 506 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 ATG4AQ8WYN0 398 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 GTF3AQ92664 365 aaKnown RBP8.27□□□□□ -1.09
YBX3-211ENST00000541351 ERP27Q96DN0 273 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 KLHL15Q96M94 604 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 BBS4Q96RK4 519 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 SAYSD1Q9NPB0 183 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 MCM8Q9UJA3 840 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 AMDHD2Q9Y303 409 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 PLLPQ9Y342 182 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 SLC25A15Q9Y619 301 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 ARFGEF3Q5TH69 2177 aa8.27□□□□□ -1.09
YBX3-211ENST00000541351 A0A1W2PR48 441 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 SDR42E2A6NKP2 422 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 MIF4GDA9UHW6 222 aaKnown RBP8.26□□□□□ -1.09
YBX3-211ENST00000541351 ZNF814B7Z6K7 855 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 GOLGA6L19H0YKK7 550 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 CLDN34H7C241 214 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 LIASO43766 372 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 RAD51DO75771 328 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 WNT11O96014 354 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 GAAP10253 952 aa8.26□□□□□ -1.09
YBX3-211ENST00000541351 CSNK2A2P19784 350 aaPredicted RBP8.26□□□□□ -1.09
YBX3-211ENST00000541351 S1PR1P21453 382 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms