RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ACAT2Q9BWD1 397 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 BARHL1Q9BZE3 327 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 PPA2Q9H2U2 334 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 SPNS1Q9H2V7 528 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 PPP1R3EQ9H7J1 279 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 EVA1AQ9H8M9 152 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 MIEF1Q9NQG6 463 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 ZC4H2Q9NQZ6 224 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 MED9Q9NWA0 146 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 EIF3KQ9UBQ5 218 aaKnown RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 PLEKHB1Q9UF11 243 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 TESQ9UGI8 421 aaKnown RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 UBQLN2Q9UHD9 624 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 ACAD8Q9UKU7 415 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 ELF5Q9UKW6 265 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 SCML1Q9UN30 329 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 CA5BQ9Y2D0 317 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 HSPB11Q9Y547 144 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 MAB21L2Q9Y586 359 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 SPIN1Q9Y657 262 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 ALG5Q9Y673 324 aa9.76□□□□□ -0.85
CHFR-219ENST00000541341 ARID1BQ8NFD5 2236 aaPredicted RBP9.76□□□□□ -0.85
CHFR-219ENST00000541341 A0A1W2PPC4 97 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 C7orf66A4D0T2 115 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 GSAPA4D1B5 854 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 NAP1L6A6NFF2 107 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 WASHC1A8K0Z3 465 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 C1QTNF3-AMACRE9PGA6 284 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 PLA2G10O15496 165 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 BNIP3LO60238 219 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 NME6O75414 186 aaPredicted RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 LEFTY1O75610 366 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 REM1O75628 298 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 OR7A10O76100 309 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 TGM6O95932 706 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ADH1BP00325 375 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 GASTP01350 101 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 FURINP09958 794 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 MYF5P13349 255 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ITGB6P18564 788 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 IL32P24001 234 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 POU1F1P28069 291 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 CD38P28907 300 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 PTGS2P35354 604 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 HNF1BP35680 557 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 HSD17B2P37059 387 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 RFX3P48380 749 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 AP3S2P59780 193 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 PFN3P60673 137 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 TRA2BP62995 288 aaKnown RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 RACK1P63244 317 aaKnown RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 DOC2AQ14183 400 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 MLC1Q15049 377 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 KIF26BQ2KJY2 2108 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 CDONQ4KMG0 1287 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 SMUG1Q53HV7 270 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ENTPD8Q5MY95 495 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 HES3Q5TGS1 186 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ZNF57Q68EA5 555 aaPredicted RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 TEX261Q6UWH6 196 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 TMEM107Q6UX40 140 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 GDPD4Q6W3E5 623 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ADGRF3Q8IZF5 1079 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 CLECL1Q8IZS7 167 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 C10orf111Q8N326 155 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 OR10Q1Q8NGQ4 319 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 OR56A3Q8NH54 315 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 OR52J3Q8NH60 311 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 BBS10Q8TAM1 723 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 GNPDA2Q8TDQ7 276 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 KLK6Q92876 244 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 OSTF1Q92882 214 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 RFT1Q96AA3 541 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 NEURL3Q96EH8 262 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 MRPL48Q96GC5 212 aaKnown RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 EGLN2Q96KS0 407 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ELF4Q99607 663 aaPredicted RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 DPH2Q9BQC3 489 aaPredicted RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 ARHGAP9Q9BRR9 750 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ZSCAN5AQ9BUG6 496 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 FNDC11Q9BVV2 318 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 PRR14Q9BWN1 585 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ZCCHC2Q9C0B9 1178 aaKnown RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 MMP28Q9H239 520 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 SUV39H2Q9H5I1 410 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 ZDHHC6Q9H6R6 413 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 CACYBPQ9HB71 228 aaKnown RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 UCKL1Q9NWZ5 548 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 LYARQ9NX58 379 aaKnown RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 CALML5Q9NZT1 146 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 H2AFY2Q9P0M6 372 aaPredicted RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 REV1Q9UBZ9 1251 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 AASSQ9UDR5 926 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 KIF25Q9UIL4 384 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 TMPRSS11EQ9UL52 423 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 LIPT1Q9Y234 373 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 TMA7Q9Y2S6 64 aaKnown RBP9.75□□□□□ -0.85
CHFR-219ENST00000541341 CDH10Q9Y6N8 788 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 U3KQ87 197 aa9.75□□□□□ -0.85
CHFR-219ENST00000541341 TRPM6Q9BX84 2022 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms