RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PTHLHP12272 177 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 GIFP27352 417 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 VSX2P58304 361 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 RPS7P62081 194 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 DGCR2P98153 550 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 PRR23CQ6ZRP0 262 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 ARL14Q8N4G2 192 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 PFN4Q8NHR9 129 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 SMG7Q92540 1137 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 RAD51AP1Q96B01 352 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 WDR89Q96FK6 387 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC38A2Q96QD8 506 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 AIF1LQ9BQI0 150 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 MED18Q9BUE0 208 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC38A1Q9H2H9 487 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 CAPN10Q9HC96 672 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 HMX1Q9NP08 348 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 NLGN3Q9NZ94 848 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 AHSPQ9NZD4 102 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 KCNK6Q9Y257 313 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 NCKAP1Q9Y2A7 1128 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 F5P12259 2224 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 KDM4EB2RXH2 506 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 CFDP00746 253 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZGLP1P0C6A0 271 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 SNRPBP14678 240 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 FGF9P31371 208 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 WASP42768 502 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 RFX3P48380 749 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 SOX9P48436 509 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 SF3A2Q15428 464 aaKnown RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 PXDC1Q5TGL8 231 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 LYPD4Q6UWN0 246 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 PLEKHM3Q6ZWE6 761 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC16A11Q8NCK7 471 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 FBXO15Q8NCQ5 510 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF431Q8TF32 576 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR7D2Q96RA2 312 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 MED28Q9H204 178 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZFP64Q9NPA5 681 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 TNFRSF10DQ9UBN6 386 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC7A7Q9UM01 511 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 FLVCR2Q9UPI3 526 aa9.68□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRANK1O15050 2925 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 A0A087WV48 116 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 A0A1W2PRG6 482 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 H3BSH0 61 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 QSOX1O00391 747 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 HLA-DQB1P01920 261 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 HLA-DPB1P04440 258 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ADRB1P08588 477 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ANKRD34CP0C6C1 535 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 PCSK2P16519 638 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 BCL6P41182 706 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 RGS8P57771 180 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 POU6F2P78424 691 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 CRYZQ08257 329 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ADAM15Q13444 863 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 DSG2Q14126 1118 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 NTRK2Q16620 822 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR4C11Q6IEV9 310 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FAM111BQ6SJ93 734 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 WDR88Q6ZMY6 472 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 GLRX5Q86SX6 157 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 PLCZ1Q86YW0 608 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 TMEFF1Q8IYR6 380 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 KLHL36Q8N4N3 616 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 CEP76Q8TAP6 659 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 DNAJA4Q8WW22 397 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 DIO2Q92813 273 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FAM83CQ9BQN1 747 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 TMEM74BQ9NUR3 256 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 STMN3Q9NZ72 180 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 EXOSC1Q9Y3B2 195 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 PCDHGB7Q9Y5F8 929 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC9B1P1A6NJY1 282 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 I3L521 148 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 RNF13O43567 381 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC43A1O75387 559 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 CXCL14O95715 111 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 AIFM1O95831 613 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FCER2P06734 321 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC6A1P30531 599 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 VIPR2P41587 438 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 CCR8P51685 355 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 SMIM11AP58511 58 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FXYD6P3P58550 94 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 TAS2R38P59533 333 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 CSNK1G2P78368 415 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 COX10Q12887 443 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 RPA4Q13156 261 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZSWIM7Q19AV6 140 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FAM46CQ5VWP2 391 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 SSX6Q7RTT6 188 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ADGRD2Q7Z7M1 963 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 AMZ2Q86W34 360 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR2L2Q8NH16 312 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 RGMAQ96B86 450 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 MED30Q96HR3 178 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms