RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 RNFT2Q96EX2 444 aa9.14□□□□□ -0.95
CLDN2-202ENST00000540876 RBM18Q96H35 190 aaKnown RBP9.14□□□□□ -0.95
CLDN2-202ENST00000540876 ZNF382Q96SR6 550 aa9.14□□□□□ -0.95
CLDN2-202ENST00000540876 EDEM2Q9BV94 578 aa9.14□□□□□ -0.95
CLDN2-202ENST00000540876 TLNRD1Q9H1K6 362 aa9.14□□□□□ -0.95
CLDN2-202ENST00000540876 TMPRSS5Q9H3S3 457 aa9.14□□□□□ -0.95
CLDN2-202ENST00000540876 SYNDIG1Q9H7V2 258 aa9.14□□□□□ -0.95
CLDN2-202ENST00000540876 CYSLTR2Q9NS75 346 aa9.14□□□□□ -0.95
CLDN2-202ENST00000540876 ACSS1Q9NUB1 689 aaPredicted RBP9.14□□□□□ -0.95
CLDN2-202ENST00000540876 METTL1Q9UBP6 276 aaKnown RBP9.14□□□□□ -0.95
CLDN2-202ENST00000540876 BACE2Q9Y5Z0 518 aa9.14□□□□□ -0.95
CLDN2-202ENST00000540876 C9orf170A2RU37 121 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 YJEFN3A6XGL0 299 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 J3KTA2 159 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 SLC28A2O43868 658 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 EBLN1P0CF75 366 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 GJA1P17302 382 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 DGCR2P98153 550 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 RBM39Q14498 530 aaKnown RBP9.13□□□□□ -0.95
CLDN2-202ENST00000540876 ZBTB6Q15916 424 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 LRIF1Q5T3J3 769 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 CDPF1Q6NVV7 123 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 TSEN54Q7Z6J9 526 aaKnown RBP9.13□□□□□ -0.95
CLDN2-202ENST00000540876 C11orf65Q8NCR3 313 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 OR5M3Q8NGP4 307 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 MISP3Q96FF7 219 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 TSSK3Q96PN8 268 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 FCRL5Q96RD9 977 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 LMAN2LQ9H0V9 348 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 SARS2Q9NP81 518 aaKnown RBP9.13□□□□□ -0.95
CLDN2-202ENST00000540876 C2orf42Q9NWW7 574 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 ZNF629Q9UEG4 869 aaPredicted RBP9.13□□□□□ -0.95
CLDN2-202ENST00000540876 NEU3Q9UQ49 428 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 SF3B6Q9Y3B4 125 aaKnown RBP9.13□□□□□ -0.95
CLDN2-202ENST00000540876 NINQ8N4C6 2090 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 C5orf58C9J3I9 102 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 H3BN98 237 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 PIRO00625 290 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 KIAA0355O15063 1070 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 RGS14O43566 566 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 TLR5O60602 858 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 KRT33AO76009 404 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 WNT1P04628 370 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 HMBSP08397 361 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 ZNF35P13682 527 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 ITGA3P26006 1051 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 RAD52P43351 418 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 WNT4P56705 351 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 NCMAPQ5T1S8 102 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 CASP12Q6UXS9 341 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 ALKAL1Q6UXT8 129 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 SERPINA11Q86U17 422 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 LRRC28Q86X40 367 aaPredicted RBP9.13□□□□□ -0.95
CLDN2-202ENST00000540876 PTOV1Q86YD1 416 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 SLC30A8Q8IWU4 369 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 POMGNT2Q8NAT1 580 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 OR52I1Q8NGK6 324 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 OR4Q3Q8NH05 313 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 GNPDA2Q8TDQ7 276 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 MAL2Q969L2 176 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 C14orf79Q96F83 325 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 SLC6A18Q96N87 628 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 GINS4Q9BRT9 223 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 TMPRSS13Q9BYE2 586 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 SLC38A1Q9H2H9 487 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 PIGMQ9H3S5 423 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 CRTAC1Q9NQ79 661 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 ASF1BQ9NVP2 202 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 RHCGQ9UBD6 479 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 FTSJ1Q9UET6 329 aa9.13□□□□□ -0.95
CLDN2-202ENST00000540876 MYBPHLA2RUH7 354 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 COLCA2A8K830 154 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 FAM227AF5H4B4 570 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 ARPC1BO15143 372 aaKnown RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 CPSF4O95639 269 aaKnown RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 RAB36O95755 333 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 RB1P06400 928 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 HOXC4P09017 264 aaPredicted RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 ANXA7P20073 488 aaKnown RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 VAMP1P23763 118 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 GABRA5P31644 462 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 RAG2P55895 527 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 WNT3AP56704 352 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 CRB2Q5IJ48 1285 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 POMZP3Q6PJE2 187 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 UNQ6494/PRO21346Q6UXR6 183 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 CLEC20AQ6ZU45 233 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 GPRIN1Q7Z2K8 1008 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 GPSM1Q86YR5 675 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 NAGSQ8N159 534 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 CHFRQ96EP1 664 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 MARS2Q96GW9 593 aaKnown RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 GPR21Q99679 349 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 MFFQ9GZY8 342 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 TOLLIPQ9H0E2 274 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 BARX1Q9HBU1 254 aaPredicted RBP9.12□□□□□ -0.95
CLDN2-202ENST00000540876 TCF7L1Q9HCS4 588 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 GFOD1Q9NXC2 390 aa9.12□□□□□ -0.95
CLDN2-202ENST00000540876 RASL12Q9NYN1 266 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms