RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 GPSM1Q86YR5 675 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 PLCZ1Q86YW0 608 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 LYSMD2Q8IV50 215 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 OR4N5Q8IXE1 308 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 UBL4BQ8N7F7 174 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 GBP7Q8N8V2 638 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 WDSUB1Q8N9V3 476 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 STEAP2Q8NFT2 490 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 OR6K3Q8NGY3 331 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 OR14K1Q8NGZ2 314 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 RDH11Q8TC12 318 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 C10orf105Q8TEF2 133 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 NEUROG1Q92886 237 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 RIT1Q92963 219 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 HGDQ93099 445 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ADIPOR1Q96A54 375 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 VPS39Q96JC1 886 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 F2RL3Q96RI0 385 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 SOX7Q9BT81 388 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 OSBPL11Q9BXB4 747 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 HDHD5Q9BXW7 423 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 CAPS2Q9BXY5 557 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 TRIM2Q9C040 744 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 EHD1Q9H4M9 534 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 RPF2Q9H7B2 306 aaKnown RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF696Q9H7X3 374 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 CHODLQ9H9P2 273 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 EML4Q9HC35 981 aaKnown RBP4.1□□□□□ -1.75
SNHG1-214ENST00000540865 DNAJC11Q9NVH1 559 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 MS4A12Q9NXJ0 267 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 FBXO5Q9UKT4 447 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 B3GALT5Q9Y2C3 310 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 CR1P17927 2039 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ALPK2Q86TB3 2170 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 MED12Q93074 2177 aa4.1□□□□□ -1.75
SNHG1-214ENST00000540865 ZCWPW2A0A1B0GU75 182 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 TMEM89A2RUT3 159 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 GRID2IPA4D2P6 1211 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 MIF4GDA9UHW6 222 aaKnown RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 FAM157AC9JC47 383 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 ACOX3O15254 700 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 KIAA0513O60268 411 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 ZIC3O60481 467 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 MBD3O95983 291 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 F7P08709 466 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 SLC35E2BP0CK96 405 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 SLC35E2P0CK97 266 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 TPSB2P20231 275 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 HNMTP50135 292 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 CDKN2DP55273 166 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 LGALS4P56470 323 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 CLDN15P56746 228 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 B3GALT5-AS1P59052 145 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 IRX1P78414 480 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 BASP1P80723 227 aaKnown RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 SARNPP82979 210 aaKnown RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 CDKL1Q00532 357 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 HMGCS1Q01581 520 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF844Q08AG5 666 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 RAB35Q15286 201 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 SPA17Q15506 151 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 TPSAB1Q15661 275 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 PPP1R3AQ16821 1122 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 AP5B1Q2VPB7 878 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 AGAP6Q5VW22 663 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 LUZP1Q86V48 1076 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 UBQLNLQ8IYU4 475 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 PRR22Q8IZ63 422 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF615Q8N8J6 731 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 LRRC57Q8N9N7 239 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 OR7G1Q8NGA0 311 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 FNDC9Q8TBE3 224 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 DOK4Q8TEW6 326 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 HSD17B8Q92506 261 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 GFM2Q969S9 779 aaKnown RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 S100PBPQ96BU1 408 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 MSI2Q96DH6 328 aaKnown RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 PDLIM5Q96HC4 596 aaKnown RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 GMPPAQ96IJ6 420 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 SERPINB12Q96P63 405 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 NODALQ96S42 347 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 PINK1Q9BXM7 581 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 CACNG6Q9BXT2 260 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 QRSL1Q9H0R6 528 aaKnown RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 MANSC1Q9H8J5 431 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 CXorf21Q9HAI6 301 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 GALNT9Q9HCQ5 603 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 C20orf96Q9NUD7 363 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 CISD1Q9NZ45 108 aaKnown RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 GPRC5BQ9NZH0 403 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 KLRF1Q9NZS2 232 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 PHF11Q9UIL8 331 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 DKKL1Q9UK85 242 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 FBXL2Q9UKC9 423 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF490Q9ULM2 529 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-214ENST00000540865 TFR2Q9UP52 801 aa4.09□□□□□ -1.75
SNHG1-214ENST00000540865 UQCRHLA0A096LP55 91 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 TCRBV7S3A2A0A539 114 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 SDR42E2A6NKP2 422 aa4.08□□□□□ -1.76
SNHG1-214ENST00000540865 EFCAB8A8MWE9 144 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms