RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 THY1P04216 161 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 ZNF136P52737 540 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 NUBP1P53384 320 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 LIN52Q52LA3 116 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 AP1ARQ63HQ0 302 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 PODNL1Q6PEZ8 512 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 ANKRD37Q7Z713 158 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 ZNF555Q8NEP9 628 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 OR4C3Q8NH37 302 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 OR14A16Q8NHC5 309 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 SLC46A1Q96NT5 459 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 GRIP2Q9C0E4 1043 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 TRIM45Q9H8W5 580 aaPredicted RBP22.68■■□□□ 1.22
TTC3-225ENST00000540756 LIN28AQ9H9Z2 209 aaKnown RBP22.68■■□□□ 1.22
TTC3-225ENST00000540756 CACYBPQ9HB71 228 aaKnown RBP22.68■■□□□ 1.22
TTC3-225ENST00000540756 KNTC1P50748 2209 aa22.68■■□□□ 1.22
TTC3-225ENST00000540756 CBLP22681 906 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 TAS2R41P59536 307 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 RFX4Q33E94 735 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 ENTPD8Q5MY95 495 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 DCST1Q5T197 706 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 DESI1Q6ICB0 168 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 PRR22Q8IZ63 422 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 OR1N1Q8NGS0 311 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 CMKLR1Q99788 373 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 POLE3Q9NRF9 147 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 PNPLA3Q9NST1 481 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 C14orf105Q9NVL8 296 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 ALOX12BO75342 701 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 GPR143P51810 404 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 EPS8Q12929 822 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 EBPQ15125 230 aaKnown RBP22.67■■□□□ 1.22
TTC3-225ENST00000540756 TTC23Q5W5X9 447 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 MRPL14Q6P1L8 145 aaKnown RBP22.67■■□□□ 1.22
TTC3-225ENST00000540756 ADAMTS16Q8TE57 1224 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 DIO2Q92813 273 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 C8orf44Q96CB5 159 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 MCHR1Q99705 422 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 TOR4AQ9NXH8 423 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 SCOCQ9UIL1 159 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 LOXL2Q9Y4K0 774 aa22.67■■□□□ 1.22
TTC3-225ENST00000540756 A0A1W2PRQ8 180 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 ADAM11O75078 769 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 CCNYL3P0C7X3 344 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 ELK4P28324 431 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 PPICP45877 212 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 EMP2P54851 167 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 RAPSNQ13702 412 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 DGCR6Q14129 220 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 MEX3DQ86XN8 651 aaKnown RBP22.66■■□□□ 1.22
TTC3-225ENST00000540756 NLGN4XQ8N0W4 816 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 ZNF786Q8N393 782 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 CNOT9Q92600 299 aaKnown RBP22.66■■□□□ 1.22
TTC3-225ENST00000540756 PAPOLBQ9NRJ5 636 aaKnown RBP22.66■■□□□ 1.22
TTC3-225ENST00000540756 AASSQ9UDR5 926 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 TMCC3Q9ULS5 477 aa22.66■■□□□ 1.22
TTC3-225ENST00000540756 C2orf92A0A1B0GVN3 265 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 SH3PXD2BA1X283 911 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 NPIPB9F8W1W9 429 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 SLC16A6O15403 523 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 SOX30O94993 753 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 SMIM18P0DKX4 95 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 ITGAMP11215 1152 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 ANXA8P13928 327 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 HTR2AP28223 471 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 SLC5A2P31639 672 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 NPRL3Q12980 569 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 HEATR5AQ86XA9 2040 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 BCKDKO14874 412 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 OR10H3O60404 316 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 RFPL3O75679 317 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 TNFAIP8O95379 198 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 PTNP21246 168 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 GSSP48637 474 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 RNF220Q5VTB9 566 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 GALNT6Q8NCL4 622 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 MR1Q95460 341 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 LCORQ96JN0 433 aaPredicted RBP22.65■■□□□ 1.22
TTC3-225ENST00000540756 CRB3Q9BUF7 120 aa22.65■■□□□ 1.22
TTC3-225ENST00000540756 ZNF223Q9UK11 482 aaPredicted RBP22.65■■□□□ 1.22
TTC3-225ENST00000540756 SMNDC1O75940 238 aaKnown RBP eCLIP22.64■■□□□ 1.221e-23■■■■■ 42.4
TTC3-225ENST00000540756 AGXTP21549 392 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 TGM1P22735 817 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 CTU2Q2VPK5 515 aaKnown RBP22.64■■□□□ 1.22
TTC3-225ENST00000540756 NDUFAF6Q330K2 333 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 EIPR1Q53HC9 387 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 TTC33Q6PID6 262 aaPredicted RBP22.64■■□□□ 1.22
TTC3-225ENST00000540756 C16orf47Q6ZP98 133 aaPredicted RBP22.64■■□□□ 1.22
TTC3-225ENST00000540756 CCDC71Q8IV32 467 aaPredicted RBP22.64■■□□□ 1.22
TTC3-225ENST00000540756 MORN4Q8NDC4 146 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 UBE2FQ969M7 185 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 WDR77Q9BQA1 342 aaPredicted RBP22.64■■□□□ 1.22
TTC3-225ENST00000540756 PSD2Q9BQI7 771 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 G6PC3Q9BUM1 346 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 COL25A1Q9BXS0 654 aaPredicted RBP22.64■■□□□ 1.22
TTC3-225ENST00000540756 SLC26A1Q9H2B4 701 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 ZNF696Q9H7X3 374 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 COPS7AQ9UBW8 275 aa22.64■■□□□ 1.22
TTC3-225ENST00000540756 A0A1W2PNU3 283 aaPredicted RBP22.64■■□□□ 1.21
TTC3-225ENST00000540756 H3BNH8 94 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms