RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 C1GALT1C1Q96EU7 318 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 OR4K3Q96R72 315 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 GAL3ST4Q96RP7 486 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 ALG8Q9BVK2 526 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 C20orf85Q9H1P6 137 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 ISYNA1Q9NPH2 558 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 SMCO4Q9NRQ5 59 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 SEMA3GQ9NS98 782 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 TMEM184CQ9NVA4 438 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 SAMD4AQ9UPU9 718 aaKnown RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 PPIL1Q9Y3C6 166 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 A0A1B0GVC2 190 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 A6NIN4 97 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 MKRN2OSH3BPM6 223 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 CRCPO75575 148 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 OR2A4O95047 310 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 ACTL6AO96019 429 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 ADH1AP07327 375 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 IFNGR1P15260 489 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 S100A2P29034 98 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 MAT2AP31153 395 aaKnown RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 RBX1P62877 108 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 SRSF3P84103 164 aaKnown RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 FOXK1P85037 733 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 INSM1Q01101 510 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 TRA2AQ13595 282 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 ARHGEF7Q14155 803 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 TGIF1Q15583 401 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 CRTC2Q53ET0 693 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 ZRANB3Q5FWF4 1079 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 ACSM5Q6NUN0 579 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 SWSAP1Q6NVH7 229 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 SLC30A6Q6NXT4 461 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 PDZD4Q76G19 769 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 ISCA2Q86U28 154 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 CALHM3Q86XJ0 350 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 GPR135Q8IZ08 494 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 CDK20Q8IZL9 346 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 GPR137CQ8N3F9 429 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 SPICQ8N5J4 248 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 NKAIN3Q8N8D7 197 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 MYLIPQ8WY64 445 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 COL26A1Q96A83 441 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 FOXRED1Q96CU9 486 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 FAM120BQ96EK7 910 aaKnown RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 OR2A7Q96R45 310 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 TEAD3Q99594 435 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 GPR20Q99678 358 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 FBXO44Q9H4M3 255 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 FZD3Q9NPG1 666 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 RLIMQ9NVW2 624 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 TMEM45AQ9NWC5 275 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 FLVCR2Q9UPI3 526 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 NEU3Q9UQ49 428 aa8.88□□□□□ -0.99
CLIP1-214ENST00000540539 MRPS18CQ9Y3D5 142 aaKnown RBP8.88□□□□□ -0.99
CLIP1-214ENST00000540539 GNG14A0A1W2PPG7 69 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 IMPA2O14732 288 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 CIDEAO60543 219 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 EIF4E2O60573 245 aaKnown RBP8.87□□□□□ -0.99
CLIP1-214ENST00000540539 FMO6PO60774 539 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 SLC19A2O60779 497 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 AKR1A1P14550 325 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 TYRP14679 529 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 CPEP16870 476 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 ACHEP22303 614 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 AVPR2P30518 371 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 CD200P41217 278 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 GATMP50440 423 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 GZMMP51124 257 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 PPIAP62937 165 aaKnown RBP8.87□□□□□ -0.99
CLIP1-214ENST00000540539 TOMM34Q15785 309 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-214ENST00000540539 UGCGQ16739 394 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 MZT2AQ6P582 158 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 TMEM71Q6P5X7 295 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 SLC27A1Q6PCB7 646 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 GPR65Q8IYL9 337 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 SYNPOQ8N3V7 929 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 SLC5A8Q8N695 610 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 RAB24Q969Q5 203 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 EMID1Q96A84 441 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-214ENST00000540539 UBL7Q96S82 380 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-214ENST00000540539 PTGES2Q9H7Z7 377 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 SLC6A13Q9NSD5 602 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 PARPBPQ9NWS1 579 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 ZDHHC8Q9ULC8 765 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 A0A1W2PPC1 479 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 SHISA3A0PJX4 238 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 M0QYT0 321 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 CST3P01034 146 aaPredicted RBP8.87□□□□□ -0.99
CLIP1-214ENST00000540539 MT-ND4LP03901 98 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 MT-ND4P03905 459 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 HOXB5P09067 269 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 EBLN1P0CF75 366 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 HOXA5P20719 270 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 GRK4P32298 578 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 SLC7A9P82251 487 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 C1DQ13901 141 aaKnown RBP8.87□□□□□ -0.99
CLIP1-214ENST00000540539 GINS1Q14691 196 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 DPYSL2Q16555 572 aa8.87□□□□□ -0.99
CLIP1-214ENST00000540539 RNASE10Q5GAN6 216 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms