RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 SAMHD1Q9Y3Z3 626 aaKnown RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 NPFFR2Q9Y5X5 522 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 HS3ST3B1Q9Y662 390 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 ASXL3Q9C0F0 2248 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 A0A1W2PRQ8 180 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 CDHR4A6H8M9 788 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 SERINC4A6NH21 518 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TGFBR3LH3BV60 316 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 M0R3G1 203 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 FAAHO00519 579 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TPST1O60507 370 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TIPRLO75663 272 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 PRSS23O95084 383 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 GADD45GO95257 159 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 CSTAP01040 98 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 H1F0P07305 194 aaKnown RBP10.89□□□□□ -0.67
VTN-202ENST00000539746 UMODP07911 640 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 PNMTP11086 282 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 UBL4AP11441 157 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 COX6A1P12074 109 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 ACADSP16219 412 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 GSTM3P21266 225 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 ABCD3P28288 659 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 RFX3P48380 749 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 CASP9P55211 416 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TAS2R41P59536 307 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 C17orf67Q0P5P2 114 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 CHAF1BQ13112 559 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 DGCR6Q14129 220 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TRAM2Q15035 370 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 PCOLCEQ15113 449 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 OGFRL1Q5TC84 451 aaPredicted RBP10.89□□□□□ -0.67
VTN-202ENST00000539746 TMEM81Q6P7N7 255 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 ZNF613Q6PF04 617 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 ENPP6Q6UWR7 440 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 SHISA6Q6ZSJ9 500 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 LANCL3Q6ZV70 420 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 MRGPREQ86SM8 312 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 CARM1Q86X55 608 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 C9orf40Q8IXQ3 194 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 RNF113BQ8IZP6 322 aaKnown RBP10.89□□□□□ -0.67
VTN-202ENST00000539746 ARMC10Q8N2F6 343 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TMEM156Q8N614 296 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 ZNF441Q8N8Z8 693 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 ZNF248Q8NDW4 579 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 ASB15Q8WXK1 588 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TMEM234Q8WY98 164 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TM9SF4Q92544 642 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 NKD1Q969G9 470 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 OMA1Q96E52 524 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 ZNF184Q99676 751 aaPredicted RBP10.89□□□□□ -0.67
VTN-202ENST00000539746 SERHL2Q9H4I8 314 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 PTGES2Q9H7Z7 377 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 C12orf10Q9HB07 376 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 P4HTMQ9NXG6 502 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 FOXJ2Q9P0K8 574 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 TMEM5Q9Y2B1 443 aa10.89□□□□□ -0.67
VTN-202ENST00000539746 GPR179Q6PRD1 2367 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 A0A1W2PS29 197 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 ALG1L2C9J202 215 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 H3BNX3 289 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 TNFRSF11BO00300 401 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 ZNF264O43296 627 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 NDUFB5O43674 189 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 SORBS2O94875 1100 aaKnown RBP10.88□□□□□ -0.67
VTN-202ENST00000539746 SEMG1P04279 462 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 ATXN8OSP0DMR3 200 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 PGCP20142 388 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 RBM34P42696 430 aaKnown RBP10.88□□□□□ -0.67
VTN-202ENST00000539746 UCNP55089 124 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 SNRPNP63162 240 aaKnown RBP10.88□□□□□ -0.67
VTN-202ENST00000539746 SPIBQ01892 262 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 COX10Q12887 443 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 CBFBQ13951 182 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 FGFBP1Q14512 234 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 NRF1Q16656 503 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 TBC1D25Q3MII6 688 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 DCST1Q5T197 706 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 ABHD17BQ5VST6 288 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 BROXQ5VW32 411 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 SLC30A6Q6NXT4 461 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 FAM199XQ6PEV8 388 aaPredicted RBP10.88□□□□□ -0.67
VTN-202ENST00000539746 FIGNL1Q6PIW4 674 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 KIRREL2Q6UWL6 708 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 PLEKHM3Q6ZWE6 761 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 RPS19BP1Q86WX3 136 aaKnown RBP10.88□□□□□ -0.67
VTN-202ENST00000539746 DTX1Q86Y01 620 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 OFCC1Q8IZS5 231 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 SLC43A2Q8N370 569 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 ZNF614Q8N883 585 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 SMYD1Q8NB12 490 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 ZNF555Q8NEP9 628 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 PIK3R3Q92569 461 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 TMBIM1Q969X1 311 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 IMMP1LQ96LU5 166 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 ARHGDIGQ99819 225 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 OSBPL11Q9BXB4 747 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 SLC19A3Q9BZV2 496 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 LHPPQ9H008 270 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms