RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZNF337Q9Y3M9 751 aa17.23■□□□□ 0.35
TNFRSF1A-212ENST00000539372 TEP1Q99973 2627 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 A6NNC1 897 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SHISA8B8ZZ34 492 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 H3BML4 177 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SEC14L5O43304 696 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 LAMP1P11279 417 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 PEPDP12955 493 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 DNAJA1P31689 397 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SERPINB5P36952 375 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 ETV4P43268 484 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 CPA2P48052 419 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SUCLG1P53597 346 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 CLDN15P56746 228 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 PRR5P85299 388 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 PTGR1Q14914 329 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 BCL2A1Q16548 175 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 DUSP5Q16690 384 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 KRT71Q3SY84 523 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 IL23RQ5VWK5 629 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 MFSD12Q6NUT3 480 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 LRIG3Q6UXM1 1119 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 ZAR1Q86SH2 424 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 KIF18BQ86Y91 864 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 HOMEZQ8IX15 550 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 MEIOBQ8N635 442 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 GATSQ8NAP1 163 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 FNDC5Q8NAU1 212 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 OR4C3Q8NH37 302 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SMPDL3BQ92485 455 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 JADE3Q92613 823 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 FAM120BQ96EK7 910 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 TMEM109Q9BVC6 243 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 RBM24Q9BX46 236 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 RASSF1Q9NS23 344 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SIRT3Q9NTG7 399 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SNX8Q9Y5X2 465 aa17.22■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SPG11Q96JI7 2443 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 OR2M5A3KFT3 312 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 WDR91A4D1P6 747 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 SLC22A20A6NK97 555 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 HCRTR2O43614 444 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 LYPLA1O75608 230 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 KCNK2O95069 426 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 ALOX5P09917 674 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 ZNF844Q08AG5 666 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 C17orf67Q0P5P2 114 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 C6orf136Q5SQH8 315 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 NUDCD3Q8IVD9 361 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 MREGQ8N565 214 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 KRTCAP2Q8N6L1 136 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 COX18Q8N8Q8 333 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 OR6Y1Q8NGX8 325 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 PPP1R14CQ8TAE6 165 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 CHMP6Q96FZ7 201 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 PIGQQ9BRB3 760 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 PARD6BQ9BYG5 372 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 ACBD3Q9H3P7 528 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 LIME1Q9H400 295 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 ZCCHC3Q9NUD5 404 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 FBXO34Q9NWN3 711 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 GALNT8Q9NY28 637 aa17.21■□□□□ 0.35
TNFRSF1A-212ENST00000539372 F8P00451 2351 aa17.21■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ANKHD1Q8IWZ3 2542 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 IGLV3-32A0A0A0MS00 114 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 A0A1W2PNV4 684 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 A0A1W2PRB8 838 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 RGS16O15492 202 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CTIFO43310 598 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 OXSR1O95747 527 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 DDX5P17844 614 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 RPL3P39023 403 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SERPINB4P48594 390 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ART1P52961 327 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CLDN20P56880 219 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CCNJQ5T5M9 372 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CPTPQ5TA50 214 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 FAM110BQ8TC76 370 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 FIG4Q92562 907 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 TUBGCP3Q96CW5 907 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PINK1Q9BXM7 581 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ZNF395Q9H8N7 513 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 VDAC3Q9Y277 283 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CELSR1Q9NYQ6 3014 aa17.2■□□□□ 0.34
TNFRSF1A-212ENST00000539372 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 FAM221AA4D161 298 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ALG1L2C9J202 215 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 NDUFB5O43674 189 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ITM2AO43736 263 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 TNFSF13O75888 250 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 HSPA4LO95757 839 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 C6orf47O95873 294 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 HMGN2P05204 90 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 EPXP11678 715 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PRIM2P49643 509 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 IST1P53990 364 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 SORDQ00796 357 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 LASP1Q14847 261 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 MLC1Q15049 377 aa17.19■□□□□ 0.34
TNFRSF1A-212ENST00000539372 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms