RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 HLCSP50747 726 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RAG2P55895 527 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 GNB1P62873 340 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MYBPC1Q00872 1141 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MAP2K1Q02750 393 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ELP6Q0PNE2 266 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 KIAA0141Q14154 515 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 BTG3Q14201 252 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 FASTKD3Q14CZ7 662 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 FCN2Q15485 313 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CD226Q15762 336 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 KCTD19Q17RG1 926 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CHRFAM7AQ494W8 412 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 LRRC37A5PQ49AS3 106 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 HIGD2BQ4VC39 106 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CMPK2Q5EBM0 449 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SPANXN4Q5MJ08 99 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RNLSQ5VYX0 342 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ADNP2Q6IQ32 1131 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PYHIN1Q6K0P9 492 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CTR9Q6PD62 1173 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 C16orf87Q6PH81 154 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 C2orf66Q6UXQ4 117 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC73Q6ZRK6 1079 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 Q6ZSR9 355 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 LRRC70Q7Z2Q7 622 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ISCA2Q86U28 154 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SERPINA9Q86WD7 417 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CACUL1Q86Y37 369 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM126BQ8IUX1 230 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC71Q8IV32 467 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF100Q8IYN0 542 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MLKLQ8NB16 471 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TRMT10AQ8TBZ6 339 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 M1APQ8TC57 530 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 UBTD2Q8WUN7 234 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SECTM1Q8WVN6 248 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PIBF1Q8WXW3 757 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 TM9SF4Q92544 642 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 EFHD2Q96C19 240 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RAB40CQ96S21 281 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RANBP9Q96S59 729 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CCNL2Q96S94 520 aaPredicted RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 RHOJQ9H4E5 214 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SLC25A19Q9HC21 320 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MRPS30Q9NP92 439 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 MIEF1Q9NQG6 463 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 DDX28Q9NUL7 540 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 SMOXQ9NWM0 555 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 CACNG5Q9UF02 275 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 NARFQ9UHQ1 456 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 UBQLN1Q9UMX0 589 aaKnown RBP0.86□□□□□ -2.27
HIF1A-204ENST00000539097 OR10H1Q9Y4A9 318 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 PCNX3Q9H6A9 2034 aa0.86□□□□□ -2.27
HIF1A-204ENST00000539097 INSRP06213 1382 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 C15orf38-AP3S2A0A0A6YYH1 394 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TRBV5-4A0A0C4DH59 114 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SYCE3A1L190 88 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MFSD2BA6NFX1 497 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 E9PQ18 207 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PPIAL4DF5H284 164 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 C16orf97H3BN30 126 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MRPS12O15235 138 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF749O43361 778 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GMNNO75496 209 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CLDN9O95484 217 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ANP32DO95626 131 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TSPAN12O95859 305 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GAS8O95995 478 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LYNP07948 512 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SMIM10L1P0DMW3 83 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SLC2A3P11169 496 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF44P15621 663 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MSR1P21757 451 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CA8P35219 290 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 DEKP35659 375 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CHI3L1P36222 383 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 FEN1P39748 380 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 BRCC3P46736 316 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 GYG1P46976 350 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 KCNJ3P48549 501 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 MEOX2P50222 304 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 LIMK2P53671 638 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 UGT2B15P54855 530 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CHRNB3Q05901 458 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CYP51A1Q16850 503 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 HLA-BQ31612 363 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 PRR30Q53SZ7 412 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF324BQ6AW86 544 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TTC27Q6P3X3 843 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 AFTPHQ6ULP2 937 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CES3Q6UWW8 571 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 Q6ZVQ6 151 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 USP50Q70EL3 339 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 BZW1Q7L1Q6 419 aaKnown RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 TAS2R42Q7RTR8 314 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CDR2LQ86X02 465 aaPredicted RBP0.85□□□□□ -2.27
HIF1A-204ENST00000539097 SLC37A3Q8NCC5 494 aa0.85□□□□□ -2.27
HIF1A-204ENST00000539097 CATSPER1Q8NEC5 780 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms