RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 IL33O95760 270 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 BAG2O95816 211 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 MT-ND1P03886 318 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 PABPC4LP0CB38 370 aaKnown RBP13.04□□□□□ -0.32
CD4-208ENST00000538827 ETS2P15036 469 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 TNFRSF1BP20333 461 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 CRYBA2P53672 197 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 PSMD4P55036 377 aaKnown RBP13.04□□□□□ -0.32
CD4-208ENST00000538827 AP2B1P63010 937 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 IFI44LQ53G44 452 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 ZNF311Q5JNZ3 666 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 ZFP1Q6P2D0 407 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 VRK2Q86Y07 508 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 KBTBD2Q8IY47 623 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 ZSCAN1Q8NBB4 408 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 C17orf47Q8NEP4 570 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 OR52E4Q8NGH9 312 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 VANGL1Q8TAA9 524 aaPredicted RBP13.04□□□□□ -0.32
CD4-208ENST00000538827 PROX1Q92786 737 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 TP53INP1Q96A56 240 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 NACC2Q96BF6 587 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 PYURFQ96I23 114 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 IP6K3Q96PC2 410 aa13.04□□□□□ -0.32
CD4-208ENST00000538827 ARGFXA6NJG6 315 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ERVH48-1M5A8F1 160 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 TO15178 435 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 KLK10O43240 276 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 TLX3O43711 291 aaPredicted RBP13.03□□□□□ -0.32
CD4-208ENST00000538827 MFN2O95140 757 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 UTS2O95399 124 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ATP6V1G2O95670 118 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 DBIP07108 87 aaKnown RBP13.03□□□□□ -0.32
CD4-208ENST00000538827 UMPSP11172 480 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 CYP4B1P13584 511 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ICAM2P13598 275 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 CD247P20963 164 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ITGA3P26006 1051 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ABCD3P28288 659 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 SLC7A1P30825 629 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 PSPHP78330 225 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 SRSF1Q07955 248 aaKnown RBP eCLIP13.03□□□□□ -0.32
CD4-208ENST00000538827 CHAF1BQ13112 559 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ELOAQ14241 798 aaKnown RBP13.03□□□□□ -0.32
CD4-208ENST00000538827 LARS2Q15031 903 aaKnown RBP13.03□□□□□ -0.32
CD4-208ENST00000538827 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.03□□□□□ -0.32
CD4-208ENST00000538827 LIN52Q52LA3 116 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 FBXW10Q5XX13 1052 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 AAGABQ6PD74 315 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ZNF836Q6ZNA1 936 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 SLC5A8Q8N695 610 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 SIRT6Q8N6T7 355 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 GOLM1Q8NBJ4 401 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ZNF248Q8NDW4 579 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 OR5M3Q8NGP4 307 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 RASSF5Q8WWW0 418 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 GEMIN6Q8WXD5 167 aaKnown RBP13.03□□□□□ -0.32
CD4-208ENST00000538827 FGF11Q92914 225 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 SLCO4A1Q96BD0 722 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
CD4-208ENST00000538827 ADOQ96SZ5 270 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 DOHHQ9BU89 302 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 MYOTQ9UBF9 498 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 BAG5Q9UL15 447 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 PCDHGA10Q9Y5H3 936 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 PTPN13Q12923 2485 aa13.03□□□□□ -0.32
CD4-208ENST00000538827 ZNF891A8MT65 544 aaPredicted RBP13.02□□□□□ -0.33
CD4-208ENST00000538827 hCG_2039718K7EN88 272 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 NKX2-8O15522 239 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 MGRN1O60291 552 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 ICOSLGO75144 302 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 TIPRLO75663 272 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 OR2J2O76002 312 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 WISP1O95388 367 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 NADKO95544 446 aaPredicted RBP13.02□□□□□ -0.33
CD4-208ENST00000538827 SERPINA7P05543 415 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 RAP2AP10114 183 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 HPGDP15428 266 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 IL7RP16871 459 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 WT1P19544 449 aaPredicted RBP13.02□□□□□ -0.33
CD4-208ENST00000538827 ST13P50502 369 aaKnown RBP13.02□□□□□ -0.33
CD4-208ENST00000538827 SESN3P58005 492 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 SELENOWP63302 87 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 Q0VFX4 171 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 CDC20Q12834 499 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 GRAMD1BQ3KR37 738 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 EIPR1Q53HC9 387 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 DCAF10Q5QP82 559 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 GATSQ8NAP1 163 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 CLEC1AQ8NC01 280 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 GPR32P1Q8NGA4 272 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 BRIX1Q8TDN6 353 aaKnown RBP13.02□□□□□ -0.33
CD4-208ENST00000538827 DIO2Q92813 273 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 POP5Q969H6 163 aaKnown RBP13.02□□□□□ -0.33
CD4-208ENST00000538827 FER1L6-AS2Q96M78 137 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 PINK1Q9BXM7 581 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 CDCP1Q9H5V8 836 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 MAGIXQ9H6Y5 334 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 MTHFD2LQ9H903 347 aaPredicted RBP13.02□□□□□ -0.33
CD4-208ENST00000538827 FLRT3Q9NZU0 649 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms