RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 EPHA6Q9UF33 1036 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 PILRBQ9UKJ0 227 aa13.1□□□□□ -0.31
ACTN1-205ENST00000538545 LY6G6EA0A0G2JKS1 128 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 ADAP00813 363 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 OSMP13725 252 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 PLXDC1Q8IUK5 500 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 PRR22Q8IZ63 422 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 RELTQ969Z4 430 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 EFHD2Q96C19 240 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-205ENST00000538545 COPS4Q9BT78 406 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 FUNDC2Q9BWH2 189 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 OR8D2Q9GZM6 311 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 LANCL2Q9NS86 450 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 CALML5Q9NZT1 146 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 COMMD3-BMI1R4GMX3 469 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 U3KQA8 63 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 IGHV3-20A0A0C4DH32 117 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 CLDN4O14493 209 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 AP3D1O14617 1153 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF182P17025 639 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-205ENST00000538545 PRKAR1BP31321 381 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 OR6C4Q8NGE1 309 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 OR8D4Q8NGM9 314 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF566Q969W8 418 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 SLC41A3Q96GZ6 507 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 CNDP2Q96KP4 475 aaKnown RBP13.09□□□□□ -0.31
ACTN1-205ENST00000538545 DPYSL5Q9BPU6 564 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 ATP13A2Q9NQ11 1180 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 DUSP22Q9NRW4 184 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 C20orf141Q9NUB4 165 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 CTSFQ9UBX1 484 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 TPRKBQ9Y3C4 175 aa13.09□□□□□ -0.31
ACTN1-205ENST00000538545 C17orf105B2RV13 164 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 CDC42EP2O14613 210 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 RGS10O43665 173 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 BRINP1O60477 761 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 ENTPD6O75354 484 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 CT45A8P0DMV1 189 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 CT45A9P0DMV2 189 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 TDGF1P13385 188 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 GNSP15586 552 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 GPR3P46089 330 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 ST13P50502 369 aaKnown RBP13.08□□□□□ -0.31
ACTN1-205ENST00000538545 NUP107P57740 925 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 CCL7P80098 99 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 LSAMPQ13449 338 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 LARS2Q15031 903 aaKnown RBP13.08□□□□□ -0.31
ACTN1-205ENST00000538545 CT45A2Q5DJT8 189 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 EXOSC6Q5RKV6 272 aaKnown RBP13.08□□□□□ -0.31
ACTN1-205ENST00000538545 B3GNT7Q8NFL0 401 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 OR4C3Q8NH37 302 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 PFN4Q8NHR9 129 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 VSTM2LQ96N03 204 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 OR10A5Q9H207 317 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 KLHL28Q9NXS3 571 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 ZNF232Q9UNY5 417 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 MGAT4BQ9UQ53 548 aa13.08□□□□□ -0.31
ACTN1-205ENST00000538545 MRPS33Q9Y291 106 aaKnown RBP13.08□□□□□ -0.31
ACTN1-205ENST00000538545 PRKYO43930 277 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 SEC14L2O76054 403 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 GABARAPL2P60520 117 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 TCTE1Q5JU00 501 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 TCEAL6Q6IPX3 200 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 ZNF595Q8IYB9 648 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 SAP25Q8TEE9 199 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 TCEAL3Q969E4 200 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 KLHDC3Q9BQ90 382 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 PTTG2Q9NZH5 202 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 KIAA0513O60268 411 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 NKX2-2O95096 273 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 EPHA4P54764 986 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 TOP3AQ13472 1001 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-205ENST00000538545 AQP6Q13520 282 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 GINS1Q14691 196 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 LANCL3Q6ZV70 420 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 GPR135Q8IZ08 494 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 PTPMT1Q8WUK0 201 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-205ENST00000538545 RPL3LQ92901 407 aaKnown RBP13.08□□□□□ -0.32
ACTN1-205ENST00000538545 SLC38A4Q969I6 547 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 MUL1Q969V5 352 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 SENP5Q96HI0 755 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-205ENST00000538545 GTPBP2Q9BX10 602 aaKnown RBP13.08□□□□□ -0.32
ACTN1-205ENST00000538545 APMAPQ9HDC9 416 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 ACOT13Q9NPJ3 140 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 GMEB2Q9UKD1 530 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 HSPE1-MOB4S4R3N1 261 aa13.08□□□□□ -0.32
ACTN1-205ENST00000538545 CDHR4A6H8M9 788 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 SYT5O00445 386 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 TLX2O43763 284 aaPredicted RBP13.07□□□□□ -0.32
ACTN1-205ENST00000538545 CLPSP04118 112 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 RPLP0P05388 317 aaKnown RBP13.07□□□□□ -0.32
ACTN1-205ENST00000538545 NID1P14543 1247 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 STT3AP46977 705 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 CDC42P60953 191 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 ST3GAL4Q11206 333 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 PRAMEF8Q5VWM4 474 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 PRAMEF7Q5VXH5 474 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 SLC30A6Q6NXT4 461 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 DHRS4L2Q6PKH6 230 aa13.07□□□□□ -0.32
ACTN1-205ENST00000538545 RRM2BQ7LG56 351 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms