RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CCBE1Q6UXH8 406 aaPredicted RBP23.2■■□□□ 1.3
RAB40C-204ENST00000538492 FLCNQ8NFG4 579 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 OTULINQ96BN8 352 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 STARD5Q9NSY2 213 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 MSRAQ9UJ68 235 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 TMEM129A0AVI4 362 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF136P52737 540 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 TPTEP56180 551 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 HNRNPA0Q13151 305 aaKnown RBP23.19■■□□□ 1.3
RAB40C-204ENST00000538492 HSDL2Q6YN16 418 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF620Q6ZNG0 422 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF761Q86XN6 746 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-204ENST00000538492 SYT14Q8NB59 555 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 POGLUT1Q8NBL1 392 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 PEX12O00623 359 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 SNPHO15079 494 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 KLF4O43474 513 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 SNX4O95219 450 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 MSL3P1P0C860 447 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 FUT1P19526 365 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF10P21506 573 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-204ENST00000538492 NT5EP21589 574 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 AZGP1P25311 298 aaKnown RBP23.19■■□□□ 1.3
RAB40C-204ENST00000538492 DEFA1P59665 94 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 DEFA3P59666 94 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 EEF1A1P68104 462 aaKnown RBP23.19■■□□□ 1.3
RAB40C-204ENST00000538492 SHC2P98077 582 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 ILF3Q12906 894 aaKnown RBP eCLIP23.19■■□□□ 1.3
RAB40C-204ENST00000538492 ADAM15Q13444 863 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 TMPRSS11AQ6ZMR5 421 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 SPATC1Q76KD6 591 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 SLC25A46Q96AG3 418 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 SAMD8Q96LT4 415 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 RIPOR3Q96MK2 946 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 MUTYHQ9UIF7 546 aa23.19■■□□□ 1.3
RAB40C-204ENST00000538492 C19orf53Q9UNZ5 99 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-204ENST00000538492 BRWD1Q9NSI6 2320 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 TCRBV21S2A2A0A5A6 115 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 TNFRSF10CO14798 259 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 DUSP8Q13202 625 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 EXOSC7Q15024 291 aaKnown RBP23.18■■□□□ 1.3
RAB40C-204ENST00000538492 CRTC2Q53ET0 693 aaPredicted RBP23.18■■□□□ 1.3
RAB40C-204ENST00000538492 OR13H1Q8NG92 308 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 PIGUQ9H490 435 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 V9GYH0 126 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 IRGMA1A4Y4 181 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 SDC2P34741 201 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 PPP1CAP62136 330 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 PSPHP78330 225 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 PGGHGQ32M88 737 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 PLK5Q496M5 336 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 DCST2Q5T1A1 773 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 FHL5Q5TD97 284 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 CAPN10Q9HC96 672 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 HRASLS2Q9NWW9 162 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 NLGN3Q9NZ94 848 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 CPNE7Q9UBL6 633 aa23.18■■□□□ 1.3
RAB40C-204ENST00000538492 EXOSC1Q9Y3B2 195 aaKnown RBP23.18■■□□□ 1.3
RAB40C-204ENST00000538492 FAM183AA6NL82 134 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 LALBAP00709 142 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 CELA2BP08218 269 aaPredicted RBP23.17■■□□□ 1.3
RAB40C-204ENST00000538492 DBPQ10586 325 aaPredicted RBP23.17■■□□□ 1.3
RAB40C-204ENST00000538492 AADACL4Q5VUY2 407 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 FIGNL1Q6PIW4 674 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 UFD1Q92890 307 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 CCDC32Q9BV29 185 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 DPH1Q9BZG8 443 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF350Q9GZX5 532 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 KCNE5Q9UJ90 142 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 PAIP2BQ9ULR5 123 aaKnown RBP23.17■■□□□ 1.3
RAB40C-204ENST00000538492 HTR2AP28223 471 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 SLC1A3P43003 542 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 GCGRP47871 477 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 MRPL2Q5T653 305 aaKnown RBP23.17■■□□□ 1.3
RAB40C-204ENST00000538492 B3GLCTQ6Y288 498 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 COX18Q8N8Q8 333 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 RFKQ969G6 155 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 PHOX2BQ99453 314 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 ARHGAP9Q9BRR9 750 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 TEX12Q9BXU0 123 aa23.17■■□□□ 1.3
RAB40C-204ENST00000538492 SF3B6Q9Y3B4 125 aaKnown RBP23.17■■□□□ 1.3
RAB40C-204ENST00000538492 AKT2P31751 481 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 WDR88Q6ZMY6 472 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 SLC22A18ASQ8N1D0 253 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF619Q8N2I2 560 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 CELF2-AS1Q8N7Q2 184 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 OR2T33Q8NG76 320 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 BAHD1Q8TBE0 780 aaPredicted RBP23.16■■□□□ 1.3
RAB40C-204ENST00000538492 HMGB4Q8WW32 186 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 KCTD7Q96MP8 289 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 CMAHPQ9Y471 501 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 CDH10Q9Y6N8 788 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 GON4LQ3T8J9 2241 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 C2orf74A8MZ97 194 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 STK25O00506 426 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 STX11O75558 287 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 IL1AP01583 271 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 SELENBP1Q13228 472 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 TPBGQ13641 420 aa23.16■■□□□ 1.3
RAB40C-204ENST00000538492 EIPR1Q53HC9 387 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms