RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 C2orf42Q9NWW7 574 aa13.04□□□□□ -0.32
LIMK1-208ENST00000538333 A0A1W2PPC4 97 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 KRBA1A5PL33 1030 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 WWP2O00308 870 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PEX12O00623 359 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 CDC42EP2O14613 210 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 UPK1BO75841 260 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 DBIP07108 87 aaKnown RBP13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PRG2P13727 222 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 CTSEP14091 401 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 RAB38P57729 211 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 C1DQ13901 141 aaKnown RBP13.03□□□□□ -0.32
LIMK1-208ENST00000538333 MRPL2Q5T653 305 aaKnown RBP13.03□□□□□ -0.32
LIMK1-208ENST00000538333 SLC30A6Q6NXT4 461 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PLEKHG7Q6ZR37 379 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 RBM12BQ8IXT5 1001 aaKnown RBP13.03□□□□□ -0.32
LIMK1-208ENST00000538333 ZDHHC1Q8WTX9 485 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 OSTF1Q92882 214 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 RNFT2Q96EX2 444 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 MSANTD3Q96H12 275 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 LRRC61Q9BV99 259 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 CACYBPQ9HB71 228 aaKnown RBP13.03□□□□□ -0.32
LIMK1-208ENST00000538333 STUB1Q9UNE7 303 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 CARD8Q9Y2G2 431 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PRUNE2Q8WUY3 3088 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 CDHR4A6H8M9 788 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 SURF4O15260 269 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 RDH16O75452 317 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 LYPD3O95274 346 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PSMA1P25786 263 aaKnown RBP13.03□□□□□ -0.32
LIMK1-208ENST00000538333 SOX6P35712 828 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 ETV6P41212 452 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 MTNR1AP48039 350 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PLAURQ03405 335 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 DEFB110Q30KQ9 67 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 AADACL4Q5VUY2 407 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 DGAT2L6Q6ZPD8 337 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PARGQ86W56 976 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 CLDN22Q8N7P3 220 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 COX18Q8N8Q8 333 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 CCDC3Q9BQI4 270 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PRRG3Q9BZD7 231 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 NLGN3Q9NZ94 848 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 DOLKQ9UPQ8 538 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 PEX16Q9Y5Y5 336 aa13.03□□□□□ -0.32
LIMK1-208ENST00000538333 NPIPA5A0A0B4J1W7 369 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 TMEM129A0AVI4 362 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 IRGMA1A4Y4 181 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 HYKKA2RU49 373 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 TRAPPC13A5PLN9 417 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 SNTNA6NMZ2 147 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 NPIPA7E9PJI5 369 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 BRINP1O60477 761 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 CBX7O95931 251 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 AK1P00568 194 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 NPIPA8P0DM63 369 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 CPEP16870 476 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 S100A5P33763 92 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 WNT4P56705 351 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 ZNF45Q02386 682 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 PGGHGQ32M88 737 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 TBC1D25Q3MII6 688 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 WDR88Q6ZMY6 472 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 C11orf74Q86VG3 221 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 RANBP3LQ86VV4 465 aaPredicted RBP13.02□□□□□ -0.33
LIMK1-208ENST00000538333 LSRQ86X29 649 aaPredicted RBP13.02□□□□□ -0.33
LIMK1-208ENST00000538333 GALNT12Q8IXK2 581 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 PARP16Q8N5Y8 322 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 OR9A4Q8NGU2 314 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 CNPPD1Q9BV87 410 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 ASPNQ9BXN1 380 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 ZNF223Q9UK11 482 aaPredicted RBP13.02□□□□□ -0.33
LIMK1-208ENST00000538333 CDH10Q9Y6N8 788 aa13.02□□□□□ -0.33
LIMK1-208ENST00000538333 A0A075B6Q4 140 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 GXYLT2A0PJZ3 443 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 SAGE2PA6NJ88 616 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 ZNF670-ZNF695F2Z2N8 137 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 APOL3O95236 402 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 CH25HO95992 272 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 GKN3PP0CG01 181 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 SLC35E2P0CK97 266 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 CHRNB1P11230 501 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 CDH3P22223 829 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 RPS19P39019 145 aaKnown RBP13.01□□□□□ -0.33
LIMK1-208ENST00000538333 BLKP51451 505 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 BNC1Q01954 994 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 DNASE1L3Q13609 305 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 FIGNL1Q6PIW4 674 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 SYT13Q7L8C5 426 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 LYSMD2Q8IV50 215 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 TDHQ8IZJ6 230 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 C19orf47Q8N9M1 422 aaKnown RBP13.01□□□□□ -0.33
LIMK1-208ENST00000538333 GPR151Q8TDV0 419 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 TM9SF4Q92544 642 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 KLHDC7BQ96G42 594 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
LIMK1-208ENST00000538333 EXOSC4Q9NPD3 245 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms