RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 PRAMEF25A6NGN4 478 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 NPIPA7E9PJI5 369 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 PEX12O00623 359 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 HS6ST1O60243 411 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 PRKNO60260 465 aaPredicted RBP11.39□□□□□ -0.59
DDB1-209ENST00000537877 TSPAN2O60636 221 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 EPPINO95925 133 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 NPIPA8P0DM63 369 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 LIPCP11150 499 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 ICAM2P13598 275 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 RHCEP18577 417 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 IL12BP29460 328 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 PNLIPRP2P54317 469 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 CAMK2BQ13554 666 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 MAPK14Q16539 360 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 GRAMD1BQ3KR37 738 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 PDZK1Q5T2W1 519 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 LPCAT4Q643R3 524 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 TSEN54Q7Z6J9 526 aaKnown RBP11.39□□□□□ -0.59
DDB1-209ENST00000537877 HMGN2P46Q86SG4 172 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 MRGPREQ86SM8 312 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 CYP4Z1Q86W10 505 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 KBTBD2Q8IY47 623 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 IL22RA1Q8N6P7 574 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 NR4A3Q92570 626 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 SLC35B4Q969S0 331 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 TMBIM1Q969X1 311 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 EFHD2Q96C19 240 aaPredicted RBP11.39□□□□□ -0.59
DDB1-209ENST00000537877 NXPE2Q96DL1 559 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 OMA1Q96E52 524 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 IP6K3Q96PC2 410 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 DEFB126Q9BYW3 111 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 KLHL4Q9C0H6 718 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 NTN4Q9HB63 628 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 UBQLN4Q9NRR5 601 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.39□□□□□ -0.59
DDB1-209ENST00000537877 KCNE5Q9UJ90 142 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 CNOT11Q9UKZ1 510 aaKnown RBP11.39□□□□□ -0.59
DDB1-209ENST00000537877 FAM32AQ9Y421 112 aaKnown RBP11.39□□□□□ -0.59
DDB1-209ENST00000537877 DTNAQ9Y4J8 743 aa11.39□□□□□ -0.59
DDB1-209ENST00000537877 CEP250Q9BV73 2442 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 CENPVL1A0A0U1RR11 272 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 SAC3D1A6NKF1 404 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 REM1O75628 298 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 NGFRP08138 427 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 ZNF23P17027 643 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 NAGAP17050 411 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 FPR1P21462 350 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 F8A1P23610 371 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 ABCD3P28288 659 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 TMED10P49755 219 aaKnown RBP11.38□□□□□ -0.59
DDB1-209ENST00000537877 RGS8P57771 180 aaPredicted RBP11.38□□□□□ -0.59
DDB1-209ENST00000537877 EFR3AQ14156 821 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 FGFBP1Q14512 234 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 MRPL2Q5T653 305 aaKnown RBP11.38□□□□□ -0.59
DDB1-209ENST00000537877 ZNF605Q86T29 641 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 COMTD1Q86VU5 262 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 EPHX4Q8IUS5 362 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 GRAMD2AQ8IUY3 354 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 SLC15A4Q8N697 577 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 PACRGLQ8N7B6 248 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 OR5K1Q8NHB7 308 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 VANGL1Q8TAA9 524 aaPredicted RBP11.38□□□□□ -0.59
DDB1-209ENST00000537877 SLC22A8Q8TCC7 542 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 SDCCAG3Q96C92 435 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 LMF1Q96S06 567 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 PIP5K1AQ99755 562 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 CIB1Q99828 191 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 REEP1Q9H902 201 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 GPN2Q9H9Y4 310 aaPredicted RBP11.38□□□□□ -0.59
DDB1-209ENST00000537877 ZNF160Q9HCG1 818 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 OAZ3Q9UMX2 235 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 CHST2Q9Y4C5 530 aa11.38□□□□□ -0.59
DDB1-209ENST00000537877 CDC14CA4D256 554 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 CDHR4A6H8M9 788 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 OR6C70A6NIJ9 312 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 TMEM200CA6NKL6 621 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 M0R3H8 397 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 E2F6O75461 281 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 PPM1BO75688 479 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 DIRAS1O95057 198 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 UTS2O95399 124 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 NADKO95544 446 aaPredicted RBP11.37□□□□□ -0.59
DDB1-209ENST00000537877 OXSR1O95747 527 aaPredicted RBP11.37□□□□□ -0.59
DDB1-209ENST00000537877 CYP4B1P13584 511 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 HPGDP15428 266 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 TBXA2RP21731 343 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 RRM2P31350 389 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 DNAJA1P31689 397 aaKnown RBP11.37□□□□□ -0.59
DDB1-209ENST00000537877 SPIBQ01892 262 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 IL10RAQ13651 578 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 LRRC36Q1X8D7 754 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 DEF8Q6ZN54 512 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 ZBTB49Q6ZSB9 765 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 HIPK1Q86Z02 1210 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 ZDHHC13Q8IUH4 622 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 LACC1Q8IV20 430 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 PRR22Q8IZ63 422 aa11.37□□□□□ -0.59
DDB1-209ENST00000537877 CLIP4Q8N3C7 705 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms