RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 FRA10AC1Q70Z53 315 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 CSNK1A1LQ8N752 337 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 DCUN1D4Q92564 292 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 DTD2Q96FN9 168 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 SLC35E1Q96K37 410 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 NICN1Q9BSH3 213 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 NDUFAF3Q9BU61 184 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 ERVK-6Q9BXR3 956 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 EHFQ9NZC4 300 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 HMG20BQ9P0W2 317 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 SMC3Q9UQE7 1217 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 TDRKHQ9Y2W6 561 aaKnown RBP2.59□□□□□ -1.99
CCDC7-208ENST00000537047 NPC1L1Q9UHC9 1359 aa2.59□□□□□ -2
CCDC7-208ENST00000537047 E9PLD3 99 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 H3BMH7 237 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 PNPP00491 289 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 RPL4P36578 427 aaKnown RBP2.58□□□□□ -2
CCDC7-208ENST00000537047 SRP54P61011 504 aaKnown RBP2.58□□□□□ -2
CCDC7-208ENST00000537047 TIMM10P62072 90 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 RPS6P62753 249 aaKnown RBP2.58□□□□□ -2
CCDC7-208ENST00000537047 OC90Q02509 493 aaPredicted RBP2.58□□□□□ -2
CCDC7-208ENST00000537047 PAX5Q02548 391 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 RPA4Q13156 261 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 ZNF699Q32M78 642 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 ACSF3Q4G176 576 aaPredicted RBP2.58□□□□□ -2
CCDC7-208ENST00000537047 AGKQ53H12 422 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 TEX44Q53QW1 395 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 LIPKQ5VXJ0 399 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 ETFRF1Q6IPR1 90 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 LRRC31Q6UY01 552 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 AMZ2Q86W34 360 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 KRTAP13-1Q8IUC0 172 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 ZNF100Q8IYN0 542 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 LYPD1Q8N2G4 141 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 SFRP1Q8N474 314 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 WDR36Q8NI36 951 aaKnown RBP2.58□□□□□ -2
CCDC7-208ENST00000537047 MCHR2Q969V1 340 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 SMIM14Q96QK8 99 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 FTHL17Q9BXU8 183 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 GHRLQ9UBU3 117 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 ASTN1O14525 1302 aa2.58□□□□□ -2
CCDC7-208ENST00000537047 KIF26AQ9ULI4 1882 aaPredicted RBP2.57□□□□□ -2
CCDC7-208ENST00000537047 IGKV1D-17A0A075B6S4 117 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 RAMP1O60894 148 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 SUPT7LO94864 414 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 ABHD2P08910 425 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 DHPSP49366 369 aaPredicted RBP2.57□□□□□ -2
CCDC7-208ENST00000537047 MYBPC1Q00872 1141 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 HFEQ30201 348 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 CYBRD1Q53TN4 286 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 IL23RQ5VWK5 629 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 ZNF57Q68EA5 555 aaPredicted RBP2.57□□□□□ -2
CCDC7-208ENST00000537047 CXCL17Q6UXB2 119 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 VPS36Q86VN1 386 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 SPC24Q8NBT2 197 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 TMEM185AQ8NFB2 350 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 NEIL3Q8TAT5 605 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 SNX21Q969T3 373 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 FGGYQ96C11 551 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 NOL4LQ96MY1 436 aaPredicted RBP2.57□□□□□ -2
CCDC7-208ENST00000537047 COQ7Q99807 217 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 CHRDL1Q9BU40 450 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 MID1IP1Q9NPA3 183 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 MEPEQ9NQ76 525 aaPredicted RBP2.57□□□□□ -2
CCDC7-208ENST00000537047 PNO1Q9NRX1 252 aaKnown RBP2.57□□□□□ -2
CCDC7-208ENST00000537047 MBD2Q9UBB5 411 aa2.57□□□□□ -2
CCDC7-208ENST00000537047 ZNF490Q9ULM2 529 aaPredicted RBP2.57□□□□□ -2
CCDC7-208ENST00000537047 EXOSC1Q9Y3B2 195 aaKnown RBP2.57□□□□□ -2
CCDC7-208ENST00000537047 TMEM89A2RUT3 159 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 PPIHO43447 177 aaKnown RBP2.56□□□□□ -2
CCDC7-208ENST00000537047 LYPLA1O75608 230 aaPredicted RBP2.56□□□□□ -2
CCDC7-208ENST00000537047 CXCL14O95715 111 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 CCNA2P20248 432 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 SLC6A8P48029 635 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 ZP4Q12836 540 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 ELAVL3Q14576 367 aaKnown RBP2.56□□□□□ -2
CCDC7-208ENST00000537047 KCNJ11Q14654 390 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 LY6EQ16553 131 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 OR2B11Q5JQS5 317 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 EOGTQ5NDL2 527 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 LEG1Q6P5S2 330 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 HACD2Q6Y1H2 254 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 BATF2Q8N1L9 274 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 KRT35Q92764 455 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 ART4Q93070 314 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 NEIL2Q969S2 332 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 C18orf25Q96B23 403 aaPredicted RBP2.56□□□□□ -2
CCDC7-208ENST00000537047 CCDC51Q96ER9 411 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 NRTNQ99748 197 aa2.56□□□□□ -2
CCDC7-208ENST00000537047 STOX2Q9P2F5 926 aaPredicted RBP2.56□□□□□ -2
CCDC7-208ENST00000537047 A0A0U1RRA0 63 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 SMIM28A0A1B0GU29 152 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 TTC26A0AVF1 554 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 SLIT3O75094 1523 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 CD55P08174 381 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 STSP08842 583 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 HOXD10P28358 340 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 CTRLP40313 264 aa2.55□□□□□ -2
CCDC7-208ENST00000537047 PLOD1Q02809 727 aaPredicted RBP2.55□□□□□ -2
CCDC7-208ENST00000537047 MOBPQ13875 183 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms