RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 METTL25Q8N6Q8 603 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PIGTQ969N2 578 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 GFM2Q969S9 779 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PIK3IP1Q96FE7 263 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 METTL2AQ96IZ6 378 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 PIP5K1AQ99755 562 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 SMR3AQ99954 134 aa17.71■□□□□ 0.43
TNFRSF1B-204ENST00000536782 IGLV3-32A0A0A0MS00 114 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 UROSP10746 265 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PRPS2P11908 318 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 FCGR2AP12318 317 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CCT5P48643 541 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 DNAJB13P59910 316 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PRR5P85299 388 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 LTBQ06643 244 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 HSPB3Q12988 150 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CCDC153Q494R4 210 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZNF551Q7Z340 670 aaPredicted RBP17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 P3H2Q8IVL5 708 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 LRRC75A-AS1Q8N1F1 130 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 EIF1ADQ8N9N8 165 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZNF610Q8N9Z0 462 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GPR151Q8TDV0 419 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PIK3R3Q92569 461 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 EGLN2Q96KS0 407 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 RHOXF2Q9BQY4 288 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 TXLNGYQ9BZA5 131 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 EQTNQ9NQ60 294 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 STOML1Q9UBI4 398 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PROCRQ9UNN8 238 aa17.7■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CSPG4Q6UVK1 2322 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GXYLT2A0PJZ3 443 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PDPK1O15530 556 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GMFGO60234 142 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 SMPD2O60906 423 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 IGKV1D-16P01601 117 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 FPR1P21462 350 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PRPH2P23942 346 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CCKARP32238 428 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GPC1P35052 558 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 KIAA0040Q15053 153 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GRAMD1BQ3KR37 738 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 VPS26BQ4G0F5 336 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 Q5PR19 223 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 APOOLQ6UXV4 268 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 SH2D5Q6ZV89 423 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 FAM214BQ7L5A3 538 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 IQCGQ9H095 443 aaKnown RBP17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 HHATLQ9HCP6 504 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 TNFRSF12AQ9NP84 129 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CCL27Q9Y4X3 112 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PRR14LQ5THK1 2151 aa17.69■□□□□ 0.42
TNFRSF1B-204ENST00000536782 SLC28A1O00337 649 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 DSCAMO60469 2012 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PLIN3O60664 434 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GUSBP1Q15486 140 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ACKR1Q16570 336 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 TMEM44Q2T9K0 475 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CLEC6AQ6EIG7 209 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PPP4R4Q6NUP7 873 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 Q71RC1 249 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZNF550Q7Z398 422 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CCDC63Q8NA47 563 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CEP70Q8NHQ1 597 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZC3HAV1LQ96H79 300 aaKnown RBP17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZNF764Q96H86 408 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PRRG4Q9BZD6 226 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZNF395Q9H8N7 513 aaPredicted RBP17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 UBTD1Q9HAC8 227 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 LRTM1Q9HBL6 345 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 OXSMQ9NWU1 459 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 C1orf109Q9NX04 203 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 VDAC3Q9Y277 283 aa17.68■□□□□ 0.42
TNFRSF1B-204ENST00000536782 UQCRHLA0A096LP55 91 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 SHISA8B8ZZ34 492 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ALG1L2C9J202 215 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 NPIPB8E9PQR5 432 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 EIF1AYO14602 144 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 RGS14O43566 566 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 AQP8O94778 261 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 NKX2-2O95096 273 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CPA3P15088 417 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZNF17P17021 662 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 TBXA2RP21731 343 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CRHR1P34998 444 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 EIF1AXP47813 144 aaKnown RBP17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PRKAG1P54619 331 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ANKRD26P1Q6NSI1 321 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CLEC9AQ6UXN8 241 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GGNQ86UU5 652 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 EXOC3L1Q86VI1 746 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CDRT4Q8N9R6 151 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 LRRN4CLQ8ND94 238 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZFP28Q8NHY6 868 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 HOXB13Q92826 284 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CIDECQ96AQ7 238 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PPCDCQ96CD2 204 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZBED6CLQ96FA7 236 aaPredicted RBP17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CCL19Q99731 98 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CCT7Q99832 543 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms