RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ACOT11Q8WXI4 607 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 RGP1Q92546 391 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 SLC25A36Q96CQ1 311 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 TMEM176AQ96HP8 235 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 GINS4Q9BRT9 223 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 EDEM2Q9BV94 578 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 MRPL37Q9BZE1 423 aaKnown RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 LAT2Q9GZY6 243 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 POLR3FQ9H1D9 316 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 REEP1Q9H902 201 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 POT1Q9NUX5 634 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 TREM2Q9NZC2 230 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SPG21Q9NZD8 308 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 MED11Q9P086 117 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 EPHA6Q9UF33 1036 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 TSPAN16Q9UKR8 245 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ZDHHC8Q9ULC8 765 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 PCDHA10Q9Y5I2 948 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 TTC3P53804 2025 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ATG2AQ2TAZ0 1938 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 GXYLT2A0PJZ3 443 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PRR23D1E9PI22 279 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 M0QZ92 97 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SULT2B1O00204 365 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 KPNA3O00505 521 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 AGPAT2O15120 278 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PPIHO43447 177 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 ACTL6AO96019 429 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 MBPP02686 304 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 S100A8P05109 93 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 THEGLP0DJG4 465 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PRR23D2P0DMB1 279 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 FPR1P21462 350 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ABCD3P28288 659 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NOS3P29474 1203 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 S100A11P31949 105 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CD86P42081 329 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 RGS4P49798 205 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 STK19P49842 368 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 RBP2P50120 134 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CCR9P51686 369 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 RAB5BP61020 215 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 LSM6P62312 80 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 SGCGQ13326 291 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ABRAXAS2Q15018 415 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SHHQ15465 462 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TSNQ15631 228 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 LRRC37A5PQ49AS3 106 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 INO80DQ53TQ3 878 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 PRRT3Q5FWE3 981 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 EXOSC6Q5RKV6 272 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 DCAF12L2Q5VW00 463 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CD276Q5ZPR3 534 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 GLT8D1Q68CQ7 371 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 PLAG1Q6DJT9 500 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 GSG1LQ6UXU4 331 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TTLL10Q6ZVT0 673 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TSEN54Q7Z6J9 526 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 TECPR1Q7Z6L1 1165 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 GPR149Q86SP6 731 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 THOC6Q86W42 341 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 RNF175Q8N4F7 328 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 DNAAF1Q8NEP3 725 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 DMBX1Q8NFW5 382 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ZCCHC10Q8TBK6 192 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SPPL2AQ8TCT8 520 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 DNAJA3Q96EY1 480 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SLC6A18Q96N87 628 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 DUSP26Q9BV47 211 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 CXCL16Q9H2A7 254 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 FBXO44Q9H4M3 255 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SUV39H2Q9H5I1 410 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ZNF576Q9H609 170 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TXNRD2Q9NNW7 524 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TREM1Q9NP99 234 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 C1orf109Q9NX04 203 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 IL17BQ9UHF5 180 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ZNF230Q9UIE0 474 aaPredicted RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 KIAA1217Q5T5P2 1943 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 IGKV6D-41A0A0C4DH26 115 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 A0A0G2JN53 185 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 A0A1W2PRU2 124 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ARPC1BO15143 372 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 APBB3O95704 486 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ATXN1LP0C7T5 689 aaKnown RBP3.49□□□□□ -1.85
MCF2-210ENST00000536274 CYP2B6P20813 491 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 BDKRB2P30411 391 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 AVPR2P30518 371 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NOS2P35228 1153 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ARL4AP40617 200 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 HTR5AP47898 357 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 HSPA7P48741 367 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 ACLYP53396 1101 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 F2RL1P55085 397 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 EGR3Q06889 387 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 NAE1Q13564 534 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 RPE65Q16518 533 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 TIMM50Q3ZCQ8 353 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 SLC36A2Q495M3 483 aa3.49□□□□□ -1.85
MCF2-210ENST00000536274 QSOX2Q6ZRP7 698 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms