RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ZNF416Q9BWM5 594 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 MRPL13Q9BYD1 178 aaKnown RBP2.64□□□□□ -1.99
VBP1-203ENST00000535916 TMEM117Q9H0C3 514 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 TMEM231Q9H6L2 316 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 ROPN1Q9HAT0 212 aaPredicted RBP2.64□□□□□ -1.99
VBP1-203ENST00000535916 VAT1LQ9HCJ6 419 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 DDX28Q9NUL7 540 aaKnown RBP2.64□□□□□ -1.99
VBP1-203ENST00000535916 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.64□□□□□ -1.99
VBP1-203ENST00000535916 RAI14Q9P0K7 980 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 RAB26Q9ULW5 256 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 SNX6Q9UNH7 406 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 DDX49Q9Y6V7 483 aaKnown RBP2.64□□□□□ -1.99
VBP1-203ENST00000535916 PTPRUQ92729 1446 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 ZMYM6O95789 1325 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 MYO10Q9HD67 2058 aa2.64□□□□□ -1.99
VBP1-203ENST00000535916 GTF3C1Q12789 2109 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 IGLV8-61A0A075B6I0 122 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 A0A0U1RQV5 110 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 XKRY2A2RUG3 117 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 TMEM110-MUSTN1A8MSY1 372 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 XPO1O14980 1071 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 SYT7O43581 403 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 NUDT21O43809 227 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 KLHL41O60662 606 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 TBX19O60806 448 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 ATP6V1G1O75348 118 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 CA11O75493 328 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 SERF1AO75920 110 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 GOT2P00505 430 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 SERPINF2P08697 491 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 SNRPCP09234 159 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 CALCBP10092 127 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 CLUP10909 449 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 TOP1P11387 765 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 PSMB1P20618 241 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 MARCKSP29966 332 aaPredicted RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 OR1D2P34982 312 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 ADRA1AP35348 466 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 SLC6A8P48029 635 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 NUMBP49757 651 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 CCL11P51671 97 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 CCR4P51679 360 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 HERV-K104P63124 156 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 TLE4Q04727 773 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 ZNF33BQ06732 778 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 IDI1Q13907 227 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 IL17AQ16552 155 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 CARTPTQ16568 116 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 ZSWIM7Q19AV6 140 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 ADPRMQ3LIE5 342 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 SLC36A3Q495N2 470 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 CCDC152Q4G0S7 254 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 TMEM41BQ5BJD5 291 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 NKAIN2Q5VXU1 208 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 CYP4V2Q6ZWL3 525 aaPredicted RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 WDR49Q8IV35 697 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 EIF1ADQ8N9N8 165 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 STKLD1Q8NE28 680 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 SRSF12Q8WXF0 261 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 STARD4Q96DR4 205 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 PSKH2Q96QS6 385 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 NUSAP1Q9BXS6 441 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 ACTR8Q9H981 624 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 LRRC40Q9H9A6 602 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 COG4Q9H9E3 785 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 VPS37BQ9H9H4 285 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 PATZ1Q9HBE1 687 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 ADGRL4Q9HBW9 690 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 MIEF1Q9NQG6 463 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 ACOXLQ9NUZ1 547 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 NMRK1Q9NWW6 199 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 VPS54Q9P1Q0 977 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 COPS7AQ9UBW8 275 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 MRPS7Q9Y2R9 242 aaKnown RBP2.63□□□□□ -1.99
VBP1-203ENST00000535916 ABCC4O15439 1325 aa2.63□□□□□ -1.99
VBP1-203ENST00000535916 PTCH1Q13635 1447 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 C15orf38-AP3S2A0A0A6YYH1 394 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 ATP6AP2A0A1C7CYW4 349 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 MFSD2BA6NFX1 497 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 ZSCAN5BA6NJL1 495 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 CHEK1O14757 476 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 MAPK13O15264 365 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 MTX2O75431 263 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 TOM1L1O75674 476 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 SURF6O75683 361 aaKnown RBP2.62□□□□□ -1.99
VBP1-203ENST00000535916 ADCY5O95622 1261 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 TXNDC12O95881 172 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 SFTPBP07988 381 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 EPB41P11171 864 aaKnown RBP2.62□□□□□ -1.99
VBP1-203ENST00000535916 RALAP11233 206 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 HTR2AP28223 471 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 PTPN6P29350 595 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 XCR1P46094 333 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 PPOXP50336 477 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 KRT31Q15323 416 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 IL23RQ5VWK5 629 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 PAQR9Q6ZVX9 377 aa2.62□□□□□ -1.99
VBP1-203ENST00000535916 YRDCQ86U90 279 aaKnown RBP2.62□□□□□ -1.99
VBP1-203ENST00000535916 ERI1Q8IV48 349 aaKnown RBP2.62□□□□□ -1.99
VBP1-203ENST00000535916 MISPQ8IVT2 679 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms