RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 WDR93Q6P2C0 686 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 ZCCHC12Q6PEW1 402 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 SPNS3Q6ZMD2 512 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 OR5M1Q8NGP8 315 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 OR6Y1Q8NGX8 325 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 PPP1R14CQ8TAE6 165 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 FBXO30Q8TB52 745 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 JADE3Q92613 823 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 CHMP6Q96FZ7 201 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 MS4A4EQ96PG1 132 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 PIGMQ9H3S5 423 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 NTMQ9P121 344 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 GIMAP2Q9UG22 337 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 ZNF337Q9Y3M9 751 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 PCNX3Q9H6A9 2034 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 AKAP6Q13023 2319 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 A0A1W2PRB8 838 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 OR2M5A3KFT3 312 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 SLC22A20A6NK97 555 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 H3BML4 177 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 SEC14L5O43304 696 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 HCRTR2O43614 444 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 NDUFB5O43674 189 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 IGKV1D-16P01601 117 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 BPGMP07738 259 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 HPGDP15428 266 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 CREB1P16220 341 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 MAP3K8P41279 467 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 PRIM2P49643 509 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 IST1P53990 364 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 RPS3AP61247 264 aaKnown RBP13.95□□□□□ -0.18
CPSF1-211ENST00000533492 MLC1Q15049 377 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 GLYR1Q49A26 553 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-211ENST00000533492 CPTPQ5TA50 214 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 FIGNL1Q6PIW4 674 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 GALNT10Q86SR1 603 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 NUDCD3Q8IVD9 361 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 FNDC5Q8NAU1 212 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 SLC16A11Q8NCK7 471 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 OR7A2PQ8NGA2 310 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 SMPDL3BQ92485 455 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 HOXB13Q92826 284 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-211ENST00000533492 CAVIN3Q969G5 261 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 GIMAP5Q96F15 307 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 C16orf58Q96GQ5 468 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 PRPF18Q99633 342 aaKnown RBP13.95□□□□□ -0.18
CPSF1-211ENST00000533492 YIPF4Q9BSR8 244 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 ZCCHC3Q9NUD5 404 aaKnown RBP13.95□□□□□ -0.18
CPSF1-211ENST00000533492 ATAD3AQ9NVI7 634 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 STOML1Q9UBI4 398 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 ATP6V1HQ9UI12 483 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 ZDHHC2Q9UIJ5 367 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 PACSIN3Q9UKS6 424 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 SNX8Q9Y5X2 465 aa13.95□□□□□ -0.18
CPSF1-211ENST00000533492 FAM221AA4D161 298 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 SCAMP2O15127 329 aaKnown RBP13.94□□□□□ -0.18
CPSF1-211ENST00000533492 TNFRSF21O75509 655 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 SKAP2O75563 359 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-211ENST00000533492 LYPLA1O75608 230 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-211ENST00000533492 SMNDC1O75940 238 aaKnown RBP eCLIP13.94□□□□□ -0.18
CPSF1-211ENST00000533492 KCNK2O95069 426 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 OXSR1O95747 527 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-211ENST00000533492 CRHP06850 196 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 ACP2P11117 423 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 SERPINB4P48594 390 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 SGCBQ16585 318 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 DUSP5Q16690 384 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 KRT71Q3SY84 523 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 XKR7Q5GH72 579 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 C6orf136Q5SQH8 315 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 IL23RQ5VWK5 629 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 MFSD12Q6NUT3 480 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 APOOLQ6UXV4 268 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 CDC20BQ86Y33 519 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 NATD1Q8N6N6 113 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 COX18Q8N8Q8 333 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 CNEP1R1Q8N9A8 125 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 OR4C3Q8NH37 302 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 NINJ1Q92982 152 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 TUBGCP3Q96CW5 907 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 C3orf30Q96M34 536 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 C1orf50Q9BV19 199 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 TMEM109Q9BVC6 243 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 PINK1Q9BXM7 581 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 GALNT8Q9NY28 637 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.94□□□□□ -0.184e-6■□□□□ 11
CPSF1-211ENST00000533492 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
CPSF1-211ENST00000533492 VDAC3Q9Y277 283 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 AP4B1Q9Y6B7 739 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 V9GYY5 206 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-211ENST00000533492 CELSR1Q9NYQ6 3014 aa13.94□□□□□ -0.18
CPSF1-211ENST00000533492 MED13LQ71F56 2210 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 IGLV3-32A0A0A0MS00 114 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 A0A1W2PNV4 684 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 A8MXE2 369 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 ALG1L2C9J202 215 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 SCDO00767 359 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 CASKO14936 926 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 RGS16O15492 202 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms