RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ZG16BQ96DA0 208 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 MUS81Q96NY9 551 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 WDR77Q9BQA1 342 aaPredicted RBP17.12■□□□□ 0.33
SMPD1-208ENST00000533123 ZNF696Q9H7X3 374 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 WDR70Q9NW82 654 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 FAM118AQ9NWS6 357 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 DTX4Q9Y2E6 619 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 PCDHGB3Q9Y5G1 929 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 ENPP4Q9Y6X5 453 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 CEP295Q9C0D2 2601 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 SYNDIG1LA6NDD5 238 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 TERTO14746 1132 aaKnown RBP17.12■□□□□ 0.33
SMPD1-208ENST00000533123 IGKV3-11P04433 115 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 CYC1P08574 325 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 ACP2P11117 423 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 ITGA2P17301 1181 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 KCNC4Q03721 635 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 DUSP5Q16690 384 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 PAPD4Q6PIY7 484 aaKnown RBP17.12■□□□□ 0.33
SMPD1-208ENST00000533123 ZNF615Q8N8J6 731 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 OR4C15Q8NGM1 316 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 C16orf52Q8NHV5 167 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 DGCR14Q96DF8 476 aaKnown RBP17.12■□□□□ 0.33
SMPD1-208ENST00000533123 NRBF2Q96F24 287 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 RDH12Q96NR8 316 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 PIP5K1AQ99755 562 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 SLC38A1Q9H2H9 487 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 GIN1Q9NXP7 522 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 C19orf25Q9UFG5 118 aaPredicted RBP17.12■□□□□ 0.33
SMPD1-208ENST00000533123 HS3ST3B1Q9Y662 390 aa17.12■□□□□ 0.33
SMPD1-208ENST00000533123 C21orf140B9A014 251 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 M0R3H8 397 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 FFAR1O14842 300 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 FCMRO60667 390 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 PRAMEF2O60811 474 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 COQ9O75208 318 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 DNAJB5O75953 348 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 EPPINO95925 133 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 SLC37A1P57057 533 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 EXOC3L2Q2M3D2 409 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 KDM4DQ6B0I6 523 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 FAM122AQ96E09 287 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 ZNF354BQ96LW1 612 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 LPAR4Q99677 370 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 SCNM1Q9BWG6 230 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 GPR87Q9BY21 358 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 KIF17Q9P2E2 1029 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 HEMK1Q9Y5R4 338 aaPredicted RBP17.11■□□□□ 0.33
SMPD1-208ENST00000533123 MRPS18BQ9Y676 258 aaKnown RBP17.11■□□□□ 0.33
SMPD1-208ENST00000533123 ZFHX4Q86UP3 3567 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 A8MVJ9 347 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 TFAP2AP05549 437 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 MMP11P24347 488 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 ZNF155Q12901 538 aaPredicted RBP17.11■□□□□ 0.33
SMPD1-208ENST00000533123 GNA13Q14344 377 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 ATAD3BQ5T9A4 648 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 ZNF605Q86T29 641 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 ZNF786Q8N393 782 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 ATG16L2Q8NAA4 619 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 NUDT9Q9BW91 350 aa17.11■□□□□ 0.33
SMPD1-208ENST00000533123 FAM32AQ9Y421 112 aaKnown RBP17.11■□□□□ 0.33
SMPD1-208ENST00000533123 LOC102723996A0A087X1L8 192 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 A0A0G2JPF8 293 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 SAGE2PA6NJ88 616 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 HNRNPCL2B2RXH8 293 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 HNRNPCL3B7ZW38 293 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 HNRNPCL4P0DMR1 293 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 CYP4B1P13584 511 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 OTX2P32243 289 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 RPL5P46777 297 aaKnown RBP17.1■□□□□ 0.33
SMPD1-208ENST00000533123 GPR143P51810 404 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 CCNJQ5T5M9 372 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 HEPHL1Q6MZM0 1159 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 DEF8Q6ZN54 512 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 CDRT4Q8N9R6 151 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 MORN4Q8NDC4 146 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 OR7G1Q8NGA0 311 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 OR1N1Q8NGS0 311 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 RMND5BQ96G75 393 aaPredicted RBP17.1■□□□□ 0.33
SMPD1-208ENST00000533123 MPP4Q96JB8 637 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 TRNT1Q96Q11 434 aaKnown RBP17.1■□□□□ 0.33
SMPD1-208ENST00000533123 FOLH1BQ9HBA9 442 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 ACER3Q9NUN7 267 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 RLIMQ9NVW2 624 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 IL17BQ9UHF5 180 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 LIPT1Q9Y234 373 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 ORC6Q9Y5N6 252 aa17.1■□□□□ 0.33
SMPD1-208ENST00000533123 DSPPQ9NZW4 1301 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 H3BNH8 94 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 PRKNO60260 465 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-208ENST00000533123 ATP6V1B1P15313 513 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 RHCEP18577 417 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 FAHD1Q6P587 224 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 TTC33Q6PID6 262 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-208ENST00000533123 KIRREL2Q6UWL6 708 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 NFAM1Q8NET5 270 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-208ENST00000533123 B3GNT7Q8NFL0 401 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 RASSF5Q8WWW0 418 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 ART5Q96L15 291 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 VSTM2LQ96N03 204 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms