RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CCNB2O95067 398 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CELF2O95319 508 aaKnown RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PTBP3O95758 552 aaKnown RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 TCF4P15884 667 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 VCLP18206 1134 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 NCF2P19878 526 aaPredicted RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 TCN1P20061 433 aaPredicted RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PTNP21246 168 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CCNOP22674 350 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PTPN6P29350 595 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CRABP2P29373 138 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 SFNP31947 248 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 RORAP35398 523 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CRATP43155 626 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ASCL1P50553 236 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ARHGDIAP52565 204 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ST8SIA6P61647 398 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 YWHAGP61981 247 aaKnown RBP eCLIP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 UBE2HP62256 183 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ENPEPQ07075 957 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 IFFO1Q0D2I5 559 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CDC20Q12834 499 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 MERTKQ12866 999 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 STX5Q13190 355 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 SRSF5Q13243 272 aaKnown RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PARP6Q2NL67 630 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 VWC2Q2TAL6 325 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 BCL7AQ4VC05 210 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CCDC58Q4VC31 144 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ZNF789Q5FWF6 425 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 C6orf136Q5SQH8 315 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CLVS2Q5SYC1 327 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 C6orf163Q5TEZ5 329 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 MARC1Q5VT66 337 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 LRRC38Q5VT99 294 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PMF1Q6P1K2 205 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CES3Q6UWW8 571 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ARSKQ6UWY0 536 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 DET1Q7L5Y6 550 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 BHLHA15Q7RTS1 189 aaPredicted RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 AMZ2Q86W34 360 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 HIPK1Q86Z02 1210 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 TBC1D10CQ8IV04 446 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CLEC4FQ8N1N0 589 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 SFRP1Q8N474 314 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 TBC1D19Q8N5T2 526 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CCNYL1Q8N7R7 359 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 NECAB1Q8N987 351 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 FNDC5Q8NAU1 212 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 SPATA4Q8NEY3 305 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 TTLQ8NG68 377 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 OR2T34Q8NGX1 318 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 RAB3IL1Q8TBN0 382 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 FANK1Q8TC84 345 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CHURC1Q8WUH1 139 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ITLN1Q8WWA0 313 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 LIPHQ8WWY8 451 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 C5orf30Q96GV9 206 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CCDC42Q96M95 316 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PARK7Q99497 189 aaKnown RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 RIT2Q99578 217 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 C11orf70Q9BRQ4 267 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 EDEM2Q9BV94 578 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 SPATA16Q9BXB7 569 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 BBS2Q9BXC9 721 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ZMYND12Q9H0C1 365 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 AKIRIN1Q9H9L7 192 aaPredicted RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 MRPS30Q9NP92 439 aaKnown RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PRMT8Q9NR22 394 aaPredicted RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 NDUFA13Q9P0J0 144 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ERVK-18Q9QC07 812 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 SLC24A2Q9UI40 661 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ELF5Q9UKW6 265 aaPredicted RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PSMD13Q9UNM6 376 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 NCKAP1Q9Y2A7 1128 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PLEKHA6Q9Y2H5 1048 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 PADI2Q9Y2J8 665 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 IFT52Q9Y366 437 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 SAMHD1Q9Y3Z3 626 aaKnown RBP2.95□□□□□ -1.94
PTPRK-220ENST00000531466 ADCY9O60503 1353 aa2.95□□□□□ -1.94
PTPRK-220ENST00000531466 CDHR2Q9BYE9 1310 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 IGHV3-16A0A0C4DH30 117 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 A0A1B0GTH9 108 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 FAM240BA0A1B0GVZ2 78 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 A0A1W2PPQ1 181 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SMIM30A4D0T7 59 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 HELTA6NFD8 242 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SMCO2A6NFE2 343 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 GLTPD2A6NH11 291 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 ARGFXA6NJG6 315 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 C12orf71A8MTZ7 269 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SLC1A7O00341 560 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 SLC30A4O14863 429 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 LIN7AO14910 233 aaPredicted RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 RRP8O43159 456 aaKnown RBP2.94□□□□□ -1.94
PTPRK-220ENST00000531466 HSF2BPO75031 334 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 TOM1L1O75674 476 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 AKAP3O75969 853 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 CLPXO76031 633 aa2.94□□□□□ -1.94
PTPRK-220ENST00000531466 UFL1O94874 794 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms