RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 OPN5Q6U736 354 aa17.51■□□□□ 0.39
SMPD1-205ENST00000531303 ENPP6Q6UWR7 440 aa17.51■□□□□ 0.39
SMPD1-205ENST00000531303 SPACA9Q96E40 222 aaPredicted RBP17.51■□□□□ 0.39
SMPD1-205ENST00000531303 SPATA5L1Q9BVQ7 753 aa17.51■□□□□ 0.39
SMPD1-205ENST00000531303 DCAF13Q9NV06 445 aaKnown RBP17.51■□□□□ 0.39
SMPD1-205ENST00000531303 ADPRHL2Q9NX46 363 aa17.51■□□□□ 0.39
SMPD1-205ENST00000531303 OR6C70A6NIJ9 312 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 AGAP5A6NIR3 686 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 H0YHG0 523 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 TPST1O60507 370 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 PRKD3O94806 890 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 HPGDP15428 266 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 IL7RP16871 459 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 TMED10P49755 219 aaKnown RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 VTCN1Q7Z7D3 282 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 ARMC10Q8N2F6 343 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 FAM86B1Q8N7N1 296 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 GATSQ8NAP1 163 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 OR10G3Q8NGC4 313 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 RSRC1Q96IZ7 334 aaKnown RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 RSPO3Q9BXY4 272 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 UBQLN4Q9NRR5 601 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 PLA2G3Q9NZ20 509 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 RPS6KA6Q9UK32 745 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 ZNF232Q9UNY5 417 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 RRP15Q9Y3B9 282 aaKnown RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 CPAMD8Q8IZJ3 1885 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 TCRBV5S2A0A599 114 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 CLDN24A6NM45 220 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 SUV39H1O43463 412 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 ENTPD5O75356 428 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 DBIP07108 87 aaKnown RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 PABPC4LP0CB38 370 aaKnown RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 NAGAP17050 411 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 ACTR3P61158 418 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 OC90Q02509 493 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 EFR3AQ14156 821 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 DUSP7Q16829 419 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 ZNF791Q3KP31 576 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 AGAP7PQ5VUJ5 663 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 FKBP9P1Q75LS8 142 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 CBLL1Q75N03 491 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 NUP54Q7Z3B4 507 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 FDCSPQ8NFU4 85 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 AGAP4Q96P64 663 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 NODALQ96S42 347 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 SEPHS2Q99611 448 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 HOXD1Q9GZZ0 328 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 TRIM45Q9H8W5 580 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 HPF1Q9NWY4 346 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 ZNF443Q9Y2A4 671 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-205ENST00000531303 PCDHGA10Q9Y5H3 936 aa17.5■□□□□ 0.39
SMPD1-205ENST00000531303 ANKRD11Q6UB99 2663 aaPredicted RBP17.49■□□□□ 0.39
SMPD1-205ENST00000531303 AQP12BA6NM10 295 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 NPIPB9F8W1W9 429 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 SCDO00767 359 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 OXSR1O95747 527 aaPredicted RBP17.49■□□□□ 0.39
SMPD1-205ENST00000531303 GUSBP08236 651 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 TNFRSF1BP20333 461 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 CD247P20963 164 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 TMPRSS3P57727 454 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 LARS2Q15031 903 aaKnown RBP17.49■□□□□ 0.39
SMPD1-205ENST00000531303 NTRK2Q16620 822 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 ISLR2Q6UXK2 745 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 ZNF836Q6ZNA1 936 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 EIF3MQ7L2H7 374 aaKnown RBP17.49■□□□□ 0.39
SMPD1-205ENST00000531303 AQP12AQ8IXF9 295 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 EID3Q8N140 333 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 GPR32P1Q8NGA4 272 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 HGDQ93099 445 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 TMCO6Q96DC7 493 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 HSH2DQ96JZ2 352 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 ABI3Q9P2A4 366 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 SAMD4AQ9UPU9 718 aaKnown RBP17.49■□□□□ 0.39
SMPD1-205ENST00000531303 AURKCQ9UQB9 309 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 IFT52Q9Y366 437 aa17.49■□□□□ 0.39
SMPD1-205ENST00000531303 PTPRQQ9UMZ3 2332 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 TMEM229AB2RXF0 380 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 K7ENP7 123 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 SCO2O43819 266 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 TBXA2RP21731 343 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 RPS4Y1P22090 263 aaKnown RBP17.48■□□□□ 0.39
SMPD1-205ENST00000531303 SOX8P57073 446 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 SELENOWP63302 87 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 ELF3P78545 371 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-205ENST00000531303 ZNF141Q15928 474 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 MTX3Q5HYI7 312 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 BICRALQ6AI39 1079 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 INO80CQ6PI98 192 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-205ENST00000531303 APOOLQ6UXV4 268 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 MARCH3Q86UD3 253 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 APLFQ8IW19 511 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-205ENST00000531303 CLIP4Q8N3C7 705 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 ZNF527Q8NB42 609 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 LZICQ8WZA0 190 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 TBL1XR1Q9BZK7 514 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 ZNF552Q9H707 407 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-205ENST00000531303 RLIMQ9NVW2 624 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 SLC13A4Q9UKG4 626 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms