RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 KCTD4Q8WVF5 259 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 UBE2E3Q969T4 207 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 RGMAQ96B86 450 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 ADGRG7Q96K78 797 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 CENPKQ9BS16 269 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 ZNF747Q9BV97 191 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 HDHD5Q9BXW7 423 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 BRINP2Q9C0B6 783 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 BPESC1Q9GZL8 116 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 MAT2BQ9NZL9 334 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 BCAP29Q9UHQ4 241 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 POU2F3Q9UKI9 436 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 AP4B1Q9Y6B7 739 aa7.26□□□□□ -1.25
CD44-232ENST00000531118 EPN1Q9Y6I3 576 aaPredicted RBP7.26□□□□□ -1.25
CD44-232ENST00000531118 CXCL13O43927 109 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 TSPAN2O60636 221 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 REM1O75628 298 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 STK16O75716 305 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 SYNGR4O95473 234 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 NTN1O95631 604 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 FAM58BPP0C7Q3 252 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 COL6A2P12110 1019 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 PGAM1P18669 254 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 IL12BP29460 328 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 IL2RGP31785 369 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 EVI2BP34910 448 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 BSGP35613 385 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 ARFIP2P53365 341 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 STX5Q13190 355 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 TBX2Q13207 712 aaPredicted RBP7.25□□□□□ -1.25
CD44-232ENST00000531118 DOC2BQ14184 412 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 TGFBIQ15582 683 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 CARTPTQ16568 116 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 CCNG2Q16589 344 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 PRICKLE4Q2TBC4 344 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 IQCCQ4KMZ1 466 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 MFSD12Q6NUT3 480 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 ZNF544Q6NX49 715 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 MED27Q6P2C8 311 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 FAM111BQ6SJ93 734 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 PEG10Q86TG7 708 aaKnown RBP7.25□□□□□ -1.25
CD44-232ENST00000531118 EXOC3L1Q86VI1 746 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 NUDT13Q86X67 352 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 TCAIMQ8N3R3 496 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 NKAPQ8N5F7 415 aaKnown RBP7.25□□□□□ -1.25
CD44-232ENST00000531118 OR7G3Q8NG95 312 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 OR52B6Q8NGF0 335 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 OR52R1Q8NGF1 315 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 UTP4Q969X6 686 aaKnown RBP7.25□□□□□ -1.25
CD44-232ENST00000531118 ESAMQ96AP7 390 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 C1GALT1C1Q96EU7 318 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 SORCS2Q96PQ0 1159 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 ADOQ96SZ5 270 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 LRRC1Q9BTT6 524 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 DDX47Q9H0S4 455 aaKnown RBP7.25□□□□□ -1.25
CD44-232ENST00000531118 CNOT10Q9H9A5 744 aaKnown RBP7.25□□□□□ -1.25
CD44-232ENST00000531118 CTNNAL1Q9UBT7 734 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 ZNF639Q9UID6 485 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 CAPN6Q9Y6Q1 641 aa7.25□□□□□ -1.25
CD44-232ENST00000531118 LRP5LA4QPB2 252 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 PGRMC2O15173 223 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 LYZL6O75951 148 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 IPO7O95373 1038 aaKnown RBP7.24□□□□□ -1.25
CD44-232ENST00000531118 ADAP00813 363 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 DHRS4L1P0CG22 281 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 ZNF17P17021 662 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 PCMT1P22061 227 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 KRT20P35900 424 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 GGT5P36269 586 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 PPICP45877 212 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 KCNJ1P48048 391 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 LIMS1P48059 325 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 FABP6P51161 128 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 ARFIP1P53367 373 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 RPS26P62854 115 aaKnown RBP7.24□□□□□ -1.25
CD44-232ENST00000531118 MGAT2Q10469 447 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 ITGADQ13349 1161 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 SLMAPQ14BN4 828 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 ZSWIM7Q19AV6 140 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 TMEM44Q2T9K0 475 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 LGSNQ5TDP6 509 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 GRHL2Q6ISB3 625 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 SLC22A25Q6T423 547 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 CYP20A1Q6UW02 462 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 NPSR1Q6W5P4 371 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 Q6ZSR9 355 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 LARP4Q71RC2 724 aaKnown RBP eCLIP7.24□□□□□ -1.25
CD44-232ENST00000531118 LRRC70Q7Z2Q7 622 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 NUFIP2Q7Z417 695 aaKnown RBP7.24□□□□□ -1.25
CD44-232ENST00000531118 LINC01356Q8N9X3 169 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 MCUQ8NE86 351 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 OR4K14Q8NGD5 310 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 HUS1BQ8NHY5 278 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 RNF128Q8TEB7 428 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 ABHD3Q8WU67 409 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 ANKRD49Q8WVL7 239 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 EFHD2Q96C19 240 aaPredicted RBP7.24□□□□□ -1.25
CD44-232ENST00000531118 MTBPQ96DY7 904 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 CERS2Q96G23 380 aa7.24□□□□□ -1.25
CD44-232ENST00000531118 RADILQ96JH8 1075 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms