RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CXCL11O14625 94 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 CASKO14936 926 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 CTAGE5O15320 804 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 PPIHO43447 177 aaKnown RBP3.58□□□□□ -1.84
C11orf88-204ENST00000529661 DUX1O43812 170 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 GMFGO60234 142 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 IGHV3-13P01766 116 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 HOXD4P09016 255 aaPredicted RBP3.58□□□□□ -1.84
C11orf88-204ENST00000529661 TOP1P11387 765 aaKnown RBP3.58□□□□□ -1.84
C11orf88-204ENST00000529661 PVRP15151 417 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 GLRA2P23416 452 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 CCNCP24863 283 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 PSMA2P25787 234 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 CASQ1P31415 396 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 BRCC3P46736 316 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 OSTNP61366 133 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 CCNA1P78396 465 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 NUCB2P80303 420 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 ABRAXAS2Q15018 415 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 LTB4RQ15722 352 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 TATDN3Q17R31 274 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 ATAD3BQ5T9A4 648 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 LEMD1Q68G75 181 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 REG3GQ6UW15 175 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 ZNF841Q6ZN19 808 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 RUFY3Q7L099 469 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 CEACAM19Q7Z692 300 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 OR56B2PQ8NGI1 322 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 OR4Q3Q8NH05 313 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 RNF139Q8WU17 664 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 OSTF1Q92882 214 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 PIWIL1Q96J94 861 aaKnown RBP3.58□□□□□ -1.84
C11orf88-204ENST00000529661 FOXN4Q96NZ1 517 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 POLR1EQ9GZS1 481 aaKnown RBP3.58□□□□□ -1.84
C11orf88-204ENST00000529661 TMEM117Q9H0C3 514 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 RHOJQ9H4E5 214 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 NMRK1Q9NWW6 199 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 FAM120CQ9NX05 1096 aaKnown RBP3.58□□□□□ -1.84
C11orf88-204ENST00000529661 UTP6Q9NYH9 597 aaKnown RBP3.58□□□□□ -1.84
C11orf88-204ENST00000529661 GALPQ9UBC7 116 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 GSTK1Q9Y2Q3 226 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 ASB3Q9Y575 518 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 NSD2O96028 1365 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 PPIAL4CA0A0B4J2A2 164 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 A0A1B0GTH9 108 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 XPO1O14980 1071 aaKnown RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 OR1F1O43749 312 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 GALR3O60755 368 aaPredicted RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 B3GAT3O94766 335 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 ANP32DO95626 131 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 JCHAINP01591 159 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 PPIAL4GP0DN37 164 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 H2AFXP16104 143 aaPredicted RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 ATP6V1C1P21283 382 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 NT5EP21589 574 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 CDH5P33151 784 aaPredicted RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 TP53BP1Q12888 1972 aaPredicted RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 PDK4Q16654 411 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 DCST2Q5T1A1 773 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 LANCL3Q6ZV70 420 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 VASH2Q86V25 355 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 PARGQ86W56 976 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 OR2T3Q8NH03 318 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 NANPQ8TBE9 248 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 ITLN1Q8WWA0 313 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 C18orf25Q96B23 403 aaPredicted RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 DHTKD1Q96HY7 919 aaPredicted RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 AKR1E2Q96JD6 320 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 PSMB7Q99436 277 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 SLC30A2Q9BRI3 323 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 TMEM121Q9BTD3 319 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 ZBP1Q9H171 429 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 PCNX3Q9H6A9 2034 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 MEPEQ9NQ76 525 aaPredicted RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 SNX6Q9UNH7 406 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 SMC3Q9UQE7 1217 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 CAB39Q9Y376 341 aaPredicted RBP3.57□□□□□ -1.84
C11orf88-204ENST00000529661 MAB21L2Q9Y586 359 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 STYXL1Q9Y6J8 313 aa3.57□□□□□ -1.84
C11orf88-204ENST00000529661 TRABD2BA6NFA1 517 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 ACOD1A6NK06 481 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 A8MUI8 341 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 FAM25EA8MYX2 175 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 PPIAL4DF5H284 164 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 MAGEB3O15480 346 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 NUDT21O43809 227 aaKnown RBP3.56□□□□□ -1.84
C11orf88-204ENST00000529661 SRSF10O75494 262 aaKnown RBP3.56□□□□□ -1.84
C11orf88-204ENST00000529661 VENTXO95231 258 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 PRAMEF12O95522 483 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 IGF1P05019 195 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 IQCF3P0C7M6 154 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 BCKDHAP12694 445 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 CA8P35219 290 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 CHI3L1P36222 383 aaPredicted RBP3.56□□□□□ -1.84
C11orf88-204ENST00000529661 ELK3P41970 407 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 OR1D4P47884 311 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 BEX3Q00994 111 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 SELPLGQ14242 412 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 MICAQ29983 383 aa3.56□□□□□ -1.84
C11orf88-204ENST00000529661 CCDC57Q2TAC2 916 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms